Gene Information

Name : ETAC_04430 (ETAC_04430)
Accession : YP_007628377.1
Strain : Edwardsiella tarda C07-087
Genome accession: NC_020796
Putative virulence/resistance : Virulence
Product : N-acetylneuraminate lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1021430 - 1022320 bp
Length : 891 bp
Strand : -
Note : COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase

DNA sequence : 
ATGAAAAAGCTAACCGGTTTGATCGCTGCACCGCATACCCCGTTTAAGGCCGACGGCAGCGTTAACTACCCGGTCATCGA
CCGCATTGCCGAACACCTGATCGGCGATGGCGTCACCGGCGCCTATGTCTTGGGCACCACCGGTGAAGGTATTCAATGTT
CGGTGGAAGAGCGCATGCGCATCGCCGAACGCTGGGTCGACGCCAGTCAGGGAAAGCTGGATCTGATCGTTCATACCGGC
GCGCTGAGCATTGCCGACGCCGTGACGCTGGCGCGCCATGCCAACACCCTGGATATCATGGCGACCTCCGTGATCGGCCC
CTGCTTCTTTAAACCGGGCAGCGTAGATGACCTGGTCGAGTACTGCCGCCTGGTGGCCGAGGCCGCGCCGGATAAAGGTT
TTTATTACTATCACTCCAGCATGTCCGGCCTGAGCATCGACATGGAGCGCTTCCTGCAAAGTGCCTCCGGGCGCATTCCC
AACCTGAGCGGCATGAAGTTCAACGCCAGCGATATGTATGAGTACCAGCGCTGCCTGCGGGTAGAGAACGGCCGCTTCGA
TATTCCGTTCGGCGTCGATGAGTTTATGCCCGCCGGGCTTGCCTGCGGCGCCACCAGCGCGGTCGGCAGCACCTATAACT
ACGCCGCGCCGCTCTATCTGCGCCTGATGGAGAGCTTCCGCCGCGGCGATATGCAGGATGTCGCCCGCTGCATGGATAAG
GTGATCGCCATCATCCGAGTTCTGGTCGAATACGGCGGCGTCGCCGCAGGCAAGGTCGCCATGCAGCTGCACGGTATCGA
CGTCGGCGATCCGCGTCGCCCGCTGCGCCCGATGACGGCCCAGCAAAAGGCCGATGCGCTGGCCAAATTCCGCGCCGCCG
AGTTCCTGTAA

Protein sequence : 
MKKLTGLIAAPHTPFKADGSVNYPVIDRIAEHLIGDGVTGAYVLGTTGEGIQCSVEERMRIAERWVDASQGKLDLIVHTG
ALSIADAVTLARHANTLDIMATSVIGPCFFKPGSVDDLVEYCRLVAEAAPDKGFYYYHSSMSGLSIDMERFLQSASGRIP
NLSGMKFNASDMYEYQRCLRVENGRFDIPFGVDEFMPAGLACGATSAVGSTYNYAAPLYLRLMESFRRGDMQDVARCMDK
VIAIIRVLVEYGGVAAGKVAMQLHGIDVGDPRRPLRPMTAQQKADALAKFRAAEFL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1776 NP_231411.1 N-acetylneuraminate lyase Not tested VPI-2 Protein 6e-104 73
VC0395_A1374 YP_001217317.1 dihydrodipicolinate synthetase family protein Not tested VPI-2 Protein 6e-104 73
VPI2_0024c ACA01841.1 dihydrodipicolinate synthase/N-acetylneuraminate lyase Not tested VPI-2 Protein 1e-103 72

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAC_04430 YP_007628377.1 N-acetylneuraminate lyase VFG1109 Protein 3e-104 73