Name : ETAC_04305 (ETAC_04305) Accession : YP_007628352.1 Strain : Edwardsiella tarda C07-087 Genome accession: NC_020796 Putative virulence/resistance : Virulence Product : porcine attaching-effacing associated protein Function : - COG functional category : - COG ID : - EC number : - Position : 990772 - 991533 bp Length : 762 bp Strand : - Note : COG4588 Accessory colonization factor AcfC, contains ABC-type periplasmic domain DNA sequence : ATGAAAAAAGTTCTAGCCACGATGATTTTTGCATTTTCTTCAGCCGCATTTGCCGACATTCATTTATATGGACCCGGTGG CCCCCACGTCGCCTTACAGGCGGCAGCGGCACAGTATACCCAAAAAACTGGGGTACCGATTACCGTACACTACGGCCCTC AGGCAACGTGGAATGATGCAGCAAAGAAGAATGCGGATATCCTATTTGGTGCCTCAGAGCAATCGGCCTTGGCCATCGTG CGCGATCATCAGAATAACTTCAGTGAGAAAGATATTGAGCCGCTGTATTTACGGCAGAGCATCCTGCTGGTAAAAAAAGG AAATCCTAAAAATATCAAGGGAGTTGAAGACCTCTCTCGCCCCGGGATTGGGATTATCGTAAACGATGGCGGTGGTACGA GTAATACCTCTGGCACGGGTGTATGGGAAGATATCGCGGGGCGTAAAGGGGATATTAAGACCGTTATCGGCATACGGCAA AATATTATCCTCTTTGCGCCCAATAGCGGGAGCGCCCGTAAGGCTCTGGAAGAGCAGCCTCAAGCCGATGTTTGGATAAC CTGGGCGGATTGGGCTATCAGTAATCCAGGAATCGGTGATGTCGTTAAGATTGAACCAGACTATATAATATGGCGCGATA TGAATATTACAGTCCGTAAGGACTCAGATGAAGAAACTCGCCAATTTGCCGCCTGGCTGCGCTCCGATGAAGCCCTTCCG ATATTTATAAAATACGGTTGGTTGAGATCCGCCGCGTCTTAA Protein sequence : MKKVLATMIFAFSSAAFADIHLYGPGGPHVALQAAAAQYTQKTGVPITVHYGPQATWNDAAKKNADILFGASEQSALAIV RDHQNNFSEKDIEPLYLRQSILLVKKGNPKNIKGVEDLSRPGIGIIVNDGGGTSNTSGTGVWEDIAGRKGDIKTVIGIRQ NIILFAPNSGSARKALEEQPQADVWITWADWAISNPGIGDVVKIEPDYIIWRDMNITVRKDSDEETRQFAAWLRSDEALP IFIKYGWLRSAAS |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
acfC | AAK20768.1 | accessory colonization factor AcfC | Virulence | VPI | Protein | 6e-57 | 55 |
acfC | AAK20798.1 | accessory colonization factor AcfC | Virulence | VPI | Protein | 6e-57 | 55 |
acfC | AAA82706.1 | AcfC | Virulence | VPI | Protein | 6e-57 | 55 |
acfC | YP_001216322.1 | accessory colonization factor AcfC | Virulence | VPI-1 | Protein | 8e-57 | 55 |
VC0841 | NP_230489.1 | accessory colonization factor AcfC | Virulence | VPI-1 | Protein | 8e-57 | 55 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
ETAC_04305 | YP_007628352.1 | porcine attaching-effacing associated protein | VFG0839 | Protein | 2e-83 | 74 |
ETAC_04305 | YP_007628352.1 | porcine attaching-effacing associated protein | VFG0105 | Protein | 3e-57 | 55 |