Gene Information

Name : ETAC_04110 (ETAC_04110)
Accession : YP_007628313.1
Strain : Edwardsiella tarda C07-087
Genome accession: NC_020796
Putative virulence/resistance : Virulence
Product : protein EsaJ
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 949386 - 950117 bp
Length : 732 bp
Strand : -
Note : COG4669 Type III secretory pathway, lipoprotein EscJ

DNA sequence :
ATGAAAATTATTCCCTGGATACTGATCTTCGGCCTGCTGCCCCTGCTGAGCGGATGCAAAAGCGAGCTGTACAGCAAGCT
GGATGAAAAAGAGGCGAATCAGATGATGGCCCTGCTGATCTACAACAACATTCCAGCCGATAAGCGGGTGGAGAAAGAGG
GGGTGACCCTGCTGGTCGAGCGGGAGCGCTTTGTCGATGCCGTCGAGGTGCTCCGCCAAAACGGCCTGCCGCGCCGTAAA
ACCGTCACCATGCAGGAGCTGTTTCCCAGCGGACAGCTGGTTACCTCCCCCGAGCAGGAGGAAGCCAAACTCAACTACCT
TAAAAGCCAGCAAATTGAAAAGATGCTTGGTAGCATGGATGGCGTCATTAATGCCGAAGTCTCGGTAGCCGAGCCGCGCG
TCATCGTCGGCGAGGCGCCGCCCCAGGCCTCCGCGGCGGTCTTCATTAAATACAGCCCCGAAATCAATCTCCCCGCCCGA
GAGGCGGAGATCCGAGCCCTCATCCACAACGGTATTCCTGGGCTCGCGCCGGATCGCATCAGCGTGACCCTGCAGCGGGC
CGAATACCGCTATCAGCCCCCGACCATCGCCGCGGCAGAGGATCATAAAATCACGCTGTATGGCCACCCGCTGCCCCGAG
AGGCGCTGGTTGCCGCGGCCTGCACCCTCCTGTTTGGCCTGCTCATTAGCCTGTTCCTGTGGCTGAGACGTCCAGGGAGG
AGCACGTCATGA

Protein sequence :
MKIIPWILIFGLLPLLSGCKSELYSKLDEKEANQMMALLIYNNIPADKRVEKEGVTLLVERERFVDAVEVLRQNGLPRRK
TVTMQELFPSGQLVTSPEQEEAKLNYLKSQQIEKMLGSMDGVINAEVSVAEPRVIVGEAPPQASAAVFIKYSPEINLPAR
EAEIRALIHNGIPGLAPDRISVTLQRAEYRYQPPTIAAAEDHKITLYGHPLPREALVAAACTLLFGLLISLFLWLRRPGR
STS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0263 YP_002345344.1 type III secretion system apparatus lipoprotein Virulence Not named Protein 3e-47 49
ssaJ CAA70532.1 secretion system apparatus Virulence SPI-2 Protein 4e-39 49
ssaJ YP_216417.1 secretion system apparatus protein SsaJ Virulence SPI-2 Protein 6e-39 49
ssaJ NP_456119.1 putative pathogenicity island lipoprotein Virulence SPI-2 Protein 6e-39 49
ssaJ NP_805080.1 pathogenicity island lipoprotein Virulence SPI-2 Protein 6e-39 49
ssaJ NP_460374.1 needle complex inner membrane lipoprotein Virulence SPI-2 Protein 6e-39 49
ssaJ CAA12196.1 SsaJ Virulence SPI-2 Protein 2e-39 47
escJ AFO66320.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 7e-35 43
escJ AFO66410.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 7e-35 43
unnamed AAL06364.1 EscJ Virulence LEE Protein 7e-31 43
lscJ AAO18027.1 LscJ Virulence TTSS locus Protein 8e-30 42
escJ YP_003223480.1 T3SS structure protein EscJ Virulence LEE Protein 2e-32 41
escJ AAC38379.1 EscJ Virulence LEE Protein 9e-32 41
escJ YP_003232148.1 T3SS structure protein EscJ Virulence LEE Protein 2e-32 41
escJ AAC31518.1 L0039 Virulence LEE Protein 9e-32 41
escJ ACU09463.1 EscJ protein Virulence LEE Protein 9e-32 41
escJ AAK26710.1 EscJ Virulence LEE Protein 2e-32 41
escJ AAL57537.1 EscJ Virulence LEE Protein 2e-32 41
escJ YP_003236093.1 T3SS structure protein EscJ Virulence LEE Protein 1e-31 41
escJ CAC81857.1 EscJ protein Virulence LEE II Protein 2e-32 41
escJ NP_290273.1 hypothetical protein Virulence LEE Protein 1e-31 41
escJ CAI43879.1 EscJ protein Virulence LEE Protein 2e-32 41
ECs4573 NP_312600.1 EscJ Virulence LEE Protein 1e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAC_04110 YP_007628313.1 protein EsaJ VFG0510 Protein 3e-39 49
ETAC_04110 YP_007628313.1 protein EsaJ VFG0725 Protein 5e-32 41
ETAC_04110 YP_007628313.1 protein EsaJ VFG0817 Protein 5e-32 41