Gene Information

Name : ETAC_03920 (ETAC_03920)
Accession : YP_007628275.1
Strain : Edwardsiella tarda C07-087
Genome accession: NC_020796
Putative virulence/resistance : Unknown
Product : LcrS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 906683 - 906949 bp
Length : 267 bp
Strand : +
Note : COG2801 Transposase and inactivated derivatives

DNA sequence :
ATGCGTAAAGCCCGTTTTACTGAGCATCAGATCATCGCTGTGATTAAGTCGGTTGAAGCCGGACGAACCGTTAAAGATGT
CTGCCGGGAGGCCGGTATCTCTGAAGCCACCTACTACAATTGGAAGTCCAGATACGGCGGCATGGAGGCTTCTGATATTA
AAAAGATCAAGGATCTTGAGGACGAGAACCGACGTCTCAAACAGATGTTTGCCGACCTGAGCCTTGAGAACCGGGCACTG
AAAGACGTTATCGAAAAAAAGCTTTAA

Protein sequence :
MRKARFTEHQIIAVIKSVEAGRTVKDVCREAGISEATYYNWKSRYGGMEASDIKKIKDLEDENRRLKQMFADLSLENRAL
KDVIEKKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 1e-33 91
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 6e-21 53
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 9e-21 53
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 4e-17 49
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 4e-17 49
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 8e-17 49
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 9e-17 47