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Name : ETAC_03165 (ETAC_03165) Accession : YP_007628124.1 Strain : Edwardsiella tarda C07-087 Genome accession: NC_020796 Putative virulence/resistance : Virulence Product : Type IV fimbrial assembly, ATPase PilB Function : - COG functional category : - COG ID : - EC number : - Position : 734312 - 735634 bp Length : 1323 bp Strand : - Note : COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB DNA sequence : ATGAGCGATCTCCAGCGGCTCTGCCGCCGCTATCGCTGCCGTCTGCTGCATCAGGATCGGCACAGCATTATCGTCGGCGG GCTGAACGAGGCGCCCGCCGCGCTGCTGGAGGCCATCCGCTTCGCGACCGGTCTGGATGCCCAGTGGCGCCCGCTGAGCC GCCGGCAGTCAGAGGAGGAGGAGGCGCTGTATCCCGCCACGGAAGATACCCAAACTGCCCCACAGCTGGAGCAGCTGCTG CTACATGCGCTGCGGCGACGCGCCTCTGACATCCACCTGGAACCCCTGGAGACACGGGGGCAAGTACGGCTGCGTATCGA CGGGGTACTGCACCCGCTGGCAGACTACCCCACGCTGCAATTCACCCGTTTAGTGACTCGCCTGAAGGTATTAGCAGGTC TGGATATCGCCGAGCGACGCCTGCCTCAGGACGGTCAGCTGCGCATCCCCCTGAGCGAGCAAACGCACAGCTTTCGCCTC TCTACGCTTCCGACGCTGCACGGTGAAAAAGCGGTGCTGCGCCAGGTCAGCACGCGGGAAACGCCCCGAAGCCTAGCCCG ACTGGGGCTGAGCCCCGCACAGCGTCAGACGCTGGCTCAGGCGTTAGCGCAGCCCCAGGGGCTGATTTTAGTGACCGGGC CAACCGGCAGCGGAAAAACCGCGACCCTCTACGCGGGACTACGCCGGCTTAACGCGCAGACGCTCAATATTTGCAGCGTT GAAGATCCCATTGAAACACCGCTGGAAAACATCAATCAGACCGCGATAGCCCCGCGCGCCGGGCTGCAGTTTGCCACCGT ACTGCGCGCCCTGCTGCGCCAAGATCCCGACGTCATCATGATCGGGGAGATCCGCGATGAAACCACCGCGCATATCGCCG TTAACGCCGCCCAAACCGGGCATCTGGTACTCTCGACCCTACACACCAATAGCGCCGCCCAAACCCTGACCCGCCTGCTA CAGCTGGGCATCGCCCCCTATCTACTGGCCGATAGCCTGCTGTTGGTCATCGCCCAGCGACTGGTGCGTCGCCTGTGCCG CCACTGTCGCCAGCGAGAGACTGACGCCGGCCGTCCCAGCTGGCTGCCGGGCGAGTGTGCCCACTGCAGCGGCGGCTACC GCGGTCGGCGCGCCCTGTTTGAGCTTCTGACGCCGACGCCCACCCTACGCCAGGCCATGCGCAGCGGCGCTGACAGCGCC CGACTGCAGCAGTTGGCCGAAGCGCAGGGGATGCTCCCGCTACACACCACGGCCCAACGTCTGGCCGAACAGGGAAAGAC CTCCTGGGGGGAAGTTCTACGGGTGCTGGGACCGCAGGCGTGA Protein sequence : MSDLQRLCRRYRCRLLHQDRHSIIVGGLNEAPAALLEAIRFATGLDAQWRPLSRRQSEEEEALYPATEDTQTAPQLEQLL LHALRRRASDIHLEPLETRGQVRLRIDGVLHPLADYPTLQFTRLVTRLKVLAGLDIAERRLPQDGQLRIPLSEQTHSFRL STLPTLHGEKAVLRQVSTRETPRSLARLGLSPAQRQTLAQALAQPQGLILVTGPTGSGKTATLYAGLRRLNAQTLNICSV EDPIETPLENINQTAIAPRAGLQFATVLRALLRQDPDVIMIGEIRDETTAHIAVNAAQTGHLVLSTLHTNSAAQTLTRLL QLGIAPYLLADSLLLVIAQRLVRRLCRHCRQRETDAGRPSWLPGECAHCSGGYRGRRALFELLTPTPTLRQAMRSGADSA RLQQLAEAQGMLPLHTTAQRLAEQGKTSWGEVLRVLGPQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-60 | 44 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 8e-61 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ETAC_03165 | YP_007628124.1 | Type IV fimbrial assembly, ATPase PilB | VFG2426 | Protein | 3e-67 | 50 |
| ETAC_03165 | YP_007628124.1 | Type IV fimbrial assembly, ATPase PilB | VFG0112 | Protein | 1e-73 | 46 |
| ETAC_03165 | YP_007628124.1 | Type IV fimbrial assembly, ATPase PilB | VFG2048 | Protein | 2e-61 | 44 |
| ETAC_03165 | YP_007628124.1 | Type IV fimbrial assembly, ATPase PilB | VFG0182 | Protein | 7e-62 | 44 |
| ETAC_03165 | YP_007628124.1 | Type IV fimbrial assembly, ATPase PilB | VFG1876 | Protein | 3e-61 | 42 |
| ETAC_03165 | YP_007628124.1 | Type IV fimbrial assembly, ATPase PilB | VFG0233 | Protein | 4e-64 | 41 |
