Gene Information

Name : ETAC_01745 (ETAC_01745)
Accession : YP_007627842.1
Strain : Edwardsiella tarda C07-087
Genome accession: NC_020796
Putative virulence/resistance : Virulence
Product : DNA-binding transcriptional regulator BasR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 414848 - 415510 bp
Length : 663 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGAAAATTCTGATCGTGGAAGACGATACCCTGATCCAGCAGGGACTGGCCCAGGCGATGGCGCGGGAGAACTACGCCTG
TGACTGTGCGGGCAGCGCGGCGAGCGCCAGCGCGCTGCTGCAGAGCAGTCACTACAGCCTGATCATCCTCGATCTGGGGC
TGCCCGGTATGGACGGTGCCAGCGCGCTGCGTCAGTGGCGACGCGAGGGCATCGACGCGCCGGTGCTGATCCTGACCGCT
CGGGACACCGTCAGCGATCGGGTCGGCGGGCTGGACGCCGGCGCCGATGACTATCTGGTGAAACCCTTCGCACTGGCCGA
GCTGCTGGCGCGCGTCCGCGCCCTGATCCGTCGCATGCAGGGACTGTGCAACAACGCTCTGCAGGTCGACGATATCCATC
TGGATCTCTCCAGCCAGCAGGTCAGCTGCGGTGGCCTGCCGCTGGAGATCACCCCCAAAGAGTTCGCTATCCTGACGCGC
CTGATGATGCGCGCCGGGCAGACCATCAGCCGCGAAGTTCTCCAGCAGGATCTCTACTCCTGGCAGGATGAGCTTAGCTC
CAACTCGCTGGAGGTACATATCCATAACCTGCGGCGCAAGCTGGGGAAAAACCGGATCAAAACCCTGCGCGGCGTCGGCT
ATCGGCTGGAGAAAACGCCGTGA

Protein sequence : 
MKILIVEDDTLIQQGLAQAMARENYACDCAGSAASASALLQSSHYSLIILDLGLPGMDGASALRQWRREGIDAPVLILTA
RDTVSDRVGGLDAGADDYLVKPFALAELLARVRALIRRMQGLCNNALQVDDIHLDLSSQQVSCGGLPLEITPKEFAILTR
LMMRAGQTISREVLQQDLYSWQDELSSNSLEVHIHNLRRKLGKNRIKTLRGVGYRLEKTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 9e-21 44
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 7e-27 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-20 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAC_01745 YP_007627842.1 DNA-binding transcriptional regulator BasR BAC0487 Protein 5e-48 64
ETAC_01745 YP_007627842.1 DNA-binding transcriptional regulator BasR BAC0083 Protein 3e-23 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAC_01745 YP_007627842.1 DNA-binding transcriptional regulator BasR VFG0473 Protein 1e-41 56
ETAC_01745 YP_007627842.1 DNA-binding transcriptional regulator BasR VFG0596 Protein 3e-21 44