Gene Information

Name : ETAC_16525 (ETAC_16525)
Accession : YP_007630786.1
Strain : Edwardsiella tarda C07-087
Genome accession: NC_020796
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3728690 - 3729712 bp
Length : 1023 bp
Strand : +
Note : COG5518 Bacteriophage capsid portal protein

DNA sequence :
ATGAGCAAGCGCAAGCCACGCAAAGCAGTCACCATGACGGCCAGCGCCCCGCAAAAAATGGAGGCGTTCACCTTCGGCGA
GCCGGTGCCAGTGCTCGATAAGCGCGATATTCTGGATTACGTCGAGTGCATCAGTAACGGTAAATGGTACGAGCCGCCGG
TCAGCTTCTCCGGGCTGGCAAAAAGCCTGCGTTCTGCTGTACATCACAGCTCACCGATTTACGTTAAGCGCAACGTGCTC
GCCAGCACCTACATTCCGCACCCGTTGCTTTCCCGTCAGGATTTCAGCCGCTTTGCGCTCGACTATCTGGTATTCGGCAA
CGCCTTTCTTGAGCAGCGCCACAGCGTCACCGGCCAGTTAATCAAGCTGCTGGCCTCACCGGCCAAATACACTCGGCGCG
GGGTCGACGAGTCGATTTTCTGGTTTGTGGAAAACTTCACTCTACCGCATGAGTTCGCGCCCGATACCGTGTTTCACCTG
CTGGAGCCCGACATTAATCAGGAGATTTACGGCCTGCCCGAATATCTCAGCGCGCTTAACTCCGCTTGGCTGAATGAAGC
CGCGACACTGTTCCGCCTCAAGTATTACCGGAACGGCGCGCACGCAGGCTACATCATGTATGTGACCGACCCGGCGCAGA
GCGCGACCGACGTCGAATCGCTACGTGAGGCGATGCGCAACTCGAAAGGGCTCGGCAACTTTAAGAACCTGTTTTTCTAC
GCCCCCGGCGGAAAAACGGACGGCATAAAAATAGTGCCACTGAGCGAGGTCGCCACAAAGGATGACTTTTTCAACATCAA
GAAAGCCTCGGCCGCCGACCTGATGGACGCGCACCGCGTACCGTTCCAGCTTATGGGCGGCAAGCCTGAGAATATTGGAT
CACTCGGTGACGTTGAGAAAGTGGCAAGGGTCTTTGTGCGTAACGAGCTGTCGCCGCTGCAGGACAGGTTCAGGGAGGTA
AACGACTGGCTCGGTATGGAAGTCATCAGGTTCAAAGAGTACACCCTCGGCAACCCGGAATAA

Protein sequence :
MSKRKPRKAVTMTASAPQKMEAFTFGEPVPVLDKRDILDYVECISNGKWYEPPVSFSGLAKSLRSAVHHSSPIYVKRNVL
ASTYIPHPLLSRQDFSRFALDYLVFGNAFLEQRHSVTGQLIKLLASPAKYTRRGVDESIFWFVENFTLPHEFAPDTVFHL
LEPDINQEIYGLPEYLSALNSAWLNEAATLFRLKYYRNGAHAGYIMYVTDPAQSATDVESLREAMRNSKGLGNFKNLFFY
APGGKTDGIKIVPLSEVATKDDFFNIKKASAADLMDAHRVPFQLMGGKPENIGSLGDVEKVARVFVRNELSPLQDRFREV
NDWLGMEVIRFKEYTLGNPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4628 NP_458710.1 probable capsid portal protein Not tested SPI-7 Protein 3e-105 63
t4321 NP_807917.1 capsid portal protein Not tested SPI-7 Protein 3e-105 63
unnamed ABR13463.1 predicted capsid packaging protein Not tested PAGI-6 Protein 2e-76 51