Gene Information

Name : ETAC_16270 (ETAC_16270)
Accession : YP_007630735.1
Strain : Edwardsiella tarda C07-087
Genome accession: NC_020796
Putative virulence/resistance : Resistance
Product : cystathionine beta-lyase/cystathionine gamma-synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3685467 - 3686627 bp
Length : 1161 bp
Strand : -
Note : COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases

DNA sequence :
GTGCGCTATCAACCGGCAACTCAGGCAGTGCGCTGTGGGCTGAACGACGATGAGCAGTATGGCAGCGTGGTTCCCCCCAT
CCATCTTTCCACCACCTACAACTTTACCGATTTTAATCAGCCGCGCACGCACGACTATGCTCGGCGCGGAAATCCCACGC
GCGACGTGGCCGAGCGGGCGCTGGCGGAGCTGGAGGGGGGCGCCGGTGCGGTGGTGACCGCCAGTGGAATGGGCGCGATC
CATCTGATGTGTACGGCGCTGCTCTCCCCCGGCGATCTGCTGCTGGCGCCGCACGACTGCTATGGCGGTAGCTATCGCCT
GTTTGACAGCCTGGCGCGCCGGGGCGCTTTCCGGGTGGTCTTCGTCGATCAGGGCGATGCGCAGGCGCTGGCCCAGGCGA
TGGCGCTGCGCCCGAAGCTGGTGCTGATTGAGACGCCGAGCAATCCGCTGCTGCGGGTGGTGGATATCGCCGCGATCTGC
GCCGCCGCGCAGCGGGTGGGCGCCCTGACGGCGGTGGATAATACGTTTCTCAGCCCGGCGCTGCAGCAGCCGCTGGCGCT
GGGCGCCGATCTGGTGCTGCACTCCTGTACCAAGTATCTGAACGGCCATTCCGACGTGGTGGCCGGCGCGGTGATCGCCA
AAACGGTGGAGATGGCGCAGGAGCTGGCCTGGTGGGGAAATAATATCGGTGTGACCGGCGCGCCTTTCGACTGCTATCTG
CTGCTGCGGGGGCTGCGCACGTTGGCGCCGCGTATCGCGCTGCAGCAGGCCAATGCGCTGCGTATCCTCGACTGGCTGCG
GGCGCAGCCGCAGGTCACGCGGCTGTATCATCCGTCGCTGCCGACGCACCCCGGCCATGCCATTGCTGCCCGCCAGCAGC
GGGGCTTTGGCGCCATGCTCAGTTTTGAGCTAGAGGGGGATGAGTCCCATCTACGGCGTTTCCTAAAATCCCTGCAACTG
TTTACACTGGCAGAGTCTCTGGGGGGGGTGGAGAGCCTGATCTCCCATGCCGCCACCATGACCCACGCCGGCATGGCGCC
GGAAGCGCGCAGGGCGGCAGGCATTAGCGACAGCCTGCTGCGTATTTCCGTGGGTATTGAGGACGGTGATGATTTAATCG
CTGATCTGGAACAGGCATTTCAGGCAGCAGCAACGAGGTAA

Protein sequence :
MRYQPATQAVRCGLNDDEQYGSVVPPIHLSTTYNFTDFNQPRTHDYARRGNPTRDVAERALAELEGGAGAVVTASGMGAI
HLMCTALLSPGDLLLAPHDCYGGSYRLFDSLARRGAFRVVFVDQGDAQALAQAMALRPKLVLIETPSNPLLRVVDIAAIC
AAAQRVGALTAVDNTFLSPALQQPLALGADLVLHSCTKYLNGHSDVVAGAVIAKTVEMAQELAWWGNNIGVTGAPFDCYL
LLRGLRTLAPRIALQQANALRILDWLRAQPQVTRLYHPSLPTHPGHAIAARQQRGFGAMLSFELEGDESHLRRFLKSLQL
FTLAESLGGVESLISHAATMTHAGMAPEARRAAGISDSLLRISVGIEDGDDLIADLEQAFQAAATR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 9e-59 42
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-60 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAC_16270 YP_007630735.1 cystathionine beta-lyase/cystathionine gamma-synthase BAC0207 Protein 5e-47 41