|
Name : lysS (ETAC_14080) Accession : YP_007630297.1 Strain : Edwardsiella tarda C07-087 Genome accession: NC_020796 Putative virulence/resistance : Virulence Product : lysyl-tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 3178257 - 3179774 bp Length : 1518 bp Strand : - Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGTCTGAACAACAGCAACAAGGCGCCGAACAGGCTCTGGACTTAAACAACGAAATGCAGACTCGCCGCGAAAAACTGGC GGCTCTGCGTAAGGAAGGCATCGCTTTCCCTAACGATTTCCGCCGCGACACCACCTCTGATAAGCTGCACAGCCTGTATG ACGGTAAGAGCAAGGAAGAGTTGGAAGCGCTGAACGTTGAAGTTTCCGTTGCCGGGCGCATGATGACCCGCCGTATCATG GGTAAAGCCTCTTTCGTTACGCTGCAGGATATGGGTGGCCGTATTCAGCTGTATGTTGCCCGTGACGATCTGAAAGACGA TGTTTACAGCGAACAGTTCAAGAAGTGGGACCTGGGTGACATCATCGGCGCACGCGGTACTCTGTTCCGTACTCAGACCG GCGAGCTGTCTATTCATTGCCACTCTATCCATCTGCTGACCAAGGCCCTGCGCCCGCTGCCGGACAAATTCCACGGTCTG TCTGACCAGGAAACCCGCTATCGCCAGCGCTATCTGGACCTGATCGCCAACGAATCTTCCCGCGAGACTTTCCGTACCCG CTCTAAGATCCTGGCCGCTATCCGCAACTTCATGGTCAACAAAGGCTTCATGGAAGTCGAAACCCCGATGATGCAGGTGA TCCCGGGGGGCGCATCCGCCCGTCCGTTCATCACCCATCACAATGCGCTGGACATCGATATGTACCTGCGTATCGCGCCG GAGCTGTACCTGAAGCGTCTGGTGGTCGGTGGCTTCGAGCGCGTGTTCGAAATCAACCGTAACTTCCGTAACGAAGGCGT CTCTCCGCGTCATAACCCTGAGTTCACCATGATGGAACTCTATATGGCCTACGCGGATTACAAAGACCTGATCGTGCTGA CCGAAGAGCTGTTCCGCACCATCAGCCAGGATGTTCTGGGCAGCAGCGTGGTGCAGTACGGCGATCAGACCTTCGATTTC GGCAAGCCGTTTATCAAGATGAGCATGAAAGAGGCCATCTGCCACTACCGTCCGGACATCGCCTCTGCCGATCTGGATGA TATGGAGAAGGCCTGCAAGATCGCCGAGTCTCTGGGCATCAAGATCGAGAAAAGCTGGGGCCTGGGCCGCGTACAGTGCG AAATCTTTGATGAAACGGCAGAGAGCCAGCTGATTCAGCCGACCTTCATCACCGAATACCCGGCAGAGGTTTCTCCGCTG GCGCGCCGTAACGACGAGAACCCGTTCATCACCGACCGCTTTGAATTCTTCATCGGCGGCCGTGAAATCGGTAACGGCTT CTCCGAGCTGAACGACGCCGAAGATCAGGCAGAGCGTTTCCTGGATCAGGTGAAAGCCAAAGATGCCGGCGACGACGAAG CCATGTTCTACGACGAAGACTACGTGACCGCGCTGGAGCACGGCCTGCCGCCGACCGCCGGTCTGGGCGTGGGTATCGAC CGTATGATGATGCTGTTCACCAACAGCCACACCATCCGTGACGTGATCCTGTTCCCGGCGATGCGTCCGCAGAAATAA Protein sequence : MSEQQQQGAEQALDLNNEMQTRREKLAALRKEGIAFPNDFRRDTTSDKLHSLYDGKSKEELEALNVEVSVAGRMMTRRIM GKASFVTLQDMGGRIQLYVARDDLKDDVYSEQFKKWDLGDIIGARGTLFRTQTGELSIHCHSIHLLTKALRPLPDKFHGL SDQETRYRQRYLDLIANESSRETFRTRSKILAAIRNFMVNKGFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAP ELYLKRLVVGGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIVLTEELFRTISQDVLGSSVVQYGDQTFDF GKPFIKMSMKEAICHYRPDIASADLDDMEKACKIAESLGIKIEKSWGLGRVQCEIFDETAESQLIQPTFITEYPAEVSPL ARRNDENPFITDRFEFFIGGREIGNGFSELNDAEDQAERFLDQVKAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGVGID RMMMLFTNSHTIRDVILFPAMRPQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-167 | 67 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 2e-87 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_007630297.1 | lysyl-tRNA ligase | VFG1668 | Protein | 2e-167 | 67 |
