Gene Information

Name : ETAC_13830 (ETAC_13830)
Accession : YP_007630247.1
Strain : Edwardsiella tarda C07-087
Genome accession: NC_020796
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3115955 - 3118513 bp
Length : 2559 bp
Strand : +
Note : COG0249 Mismatch repair ATPase (MutS family)

DNA sequence :
ATGACCACCACGGACAATCTTGACGCTCACACCCCGATGATGCAGCAGTATCTGCGCCTCAAGGCGCAGCACCCCGACAT
CCTGCTGTTTTACCGGATGGGAGACTTTTACGAACTGTTTTATGACGATGCCCGCCGTGCGTCACAGCTGCTGGATATCT
CCCTGACCAAACGCGGTGCCTCCGCCGGGGAGCCGATCCCGATGGCCGGCGTGCCTTATCACGCGGTAGAGAACTACCTG
GCCAAGCTGGTGCAGCTGGGGGAGTCGGTGGCCATCTGCGAACAGATTGGCGATCCCGCCACCAGCAAGGGGCCGGTAGA
GCGTAAGGTGGTGCGGATCGTGACGCCGGGCACCGTCAGCGATGAGGCGCTGCTCAGCGAGCGGCAGGACAACCTGCTGG
CGGCGATCTGGCAGTCGCCCAACGGCTTTGGCTACGCCACGCTGGATATCAGCTCTGGACGCTTCCGCGCCGCTGAGCCG
CAGGACGCCGATAGCATGGCCGCGGAGCTGCAGCGCACCAATCCGTCGGAGCTGCTGTATCCAGAAGAGTTTGCCGCCAT
GGCGCTGATCGAGCAGCGCCGTGGACTACGCCGCCGCCCGATGTGGGAGTTCGAGCTAGAGACCGCCCGCCAGCAGCTCA
ACCTGCAGTTCGGCACCCGCGATCTGAGCGGCTTTGGCGTCGAACAGGCTCCCCTGGCGCTGCGCGCCGCCGGCTGCCTG
CTGCAGTATGCCAAAGACACCCAGCGCACCATGCTGCCCCATATCCGTGCCATCACCATGGAGCGCCAGCAGGACGGCAT
CATTATGGACGCCGCCACCCGCCGCAATCTGGAGCTGACCCAGAATCTGGCCGGTGGCCAAGAGAACACCCTGGCGGCGG
TGCTGGATGCCAGCGTCACCGCGATGGGCAGCCGAATGATCAAACGCTGGCTGCATATGCCGATCCGCGATCGCCAGGCG
CTGCAGCGGCGTCAGGACGCTATCGAGGCGCTGCTGCCGCTGATTGATGAGCTGCAGCCCCTGCTGCGCCAGGTCGGCGA
TCTGGAGCGCATTCTGGCCCGACTGGCACTGCGCAGCGCCCGTCCGCGCGATCTGGCGCGCATGCGCGTCGCCTTCCAAC
AGCTGCCAACCCTACAAACCCTGCTCGGCGAGCGCGGCGGTGAGGCGCTGGCGCCGCTGGCGCGTCAGGCGGGCCGCTTC
GATGCCCTGTGCGAACTGCTGGAGCGGGCGCTGGTTGACACGCCGCCGGTGCTGGTGCGCGACGGCGGCGTGATCGCCAG
CGGCTATCACGCCGAGCTCGACGAATGGCGTGCGCTGGCGGACGGCGCCAGCGACTACCTCGATCGGCTGGAGATCCGCG
AACGTGAGAAGCTGGGGCTGGATACCCTGAAGGTCGGCTTTAACGCGGTGCACGGCTACTATATTCAGGTCAGCCGCGGA
CAGAGTCACCTGGTGCCTATCCACTACGTTCGCCGCCAGACGCTGAAAAACGCCGAGCGCTACATTATCCCCGAACTGAA
AGAGTATGAGGATAAGGTACTGACCTCGAAGGGCAAGGCGCTGGCGCTGGAGAAGCAGCTGTATGACGAGCTGTTCGACC
TGCTGCTGCCGCACCTGGCGGAGCTGCAGCAGAGCGCGACGGCGCTGGCCGAGCTGGACGTCCTGAGCGGCCTGGCTGAG
CGGGCCGACCGCTACGGCTACGTCCGCCCACAGCTGAGCGAACGCGCCGGGATCAATATCGAAGAGGGGCGCCACCCGGT
AGTGGAGCAGGTGCTCAAAGAGCCCTTTATCGCCAACCCGCTGACCCTGTCCAGCGCACGGCGCATGCTGGTGATCACCG
GCCCCAACATGGGCGGCAAGAGTACCTATATGCGCCAGGCGGCGCTGATCGTGCTGATGGCGCACATCGGCAGCTTTGTC
CCGGCGCAGCGCGCCGTTATCGGCCCGGTCGATCGCATCTTTACCCGCGTCGGCGCCGCCGACGATCTGGCCTCCGGCCG
CTCCACCTTTATGGTGGAGATGACCGAAACGGCCAATATCCTGCACAACGCGACCGAGCACAGCCTGGTGCTGATGGATG
AGATTGGCCGCGGCACCTCCACCTACGACGGCCTGTCGCTGGCCTGGGCCTGCGCCGAAAGCCTGGCCAGCCGCATCAAG
GCGATGACGCTGTTCGCCACCCACTACTTTGAGCTGACCACCCTGCCGGAGAAGCTGGAGGGGGTCTACAACGTGCATCT
GGACGCGCTGGAGCACGGCGAGACCATCGCCTTTATGCACAGCGTACAGGACGGCGCGGCCAGCAAGAGCTACGGGCTGG
CGGTGGCCGCGTTGGCCGGGGTGCCGCGCGAGGTGATCAAGCGCGCGCGCCAGAAGCTGCGCGAGCTGGAAACCCTGTCG
CAGCACGGCAGCCAGAGCCAGGCAGACAGCGCTCAGCTGCCGCTACTGGTCGAGGCGGAGCCGTCGGCGGCGCTGGAGGC
GCTGACGGCGATCGATCCCGATGCGCTGACGCCGCGCCAGGCGCTGGACTGGCTCTATCGCCTCAAGGGGATGCTGTAG

Protein sequence :
MTTTDNLDAHTPMMQQYLRLKAQHPDILLFYRMGDFYELFYDDARRASQLLDISLTKRGASAGEPIPMAGVPYHAVENYL
AKLVQLGESVAICEQIGDPATSKGPVERKVVRIVTPGTVSDEALLSERQDNLLAAIWQSPNGFGYATLDISSGRFRAAEP
QDADSMAAELQRTNPSELLYPEEFAAMALIEQRRGLRRRPMWEFELETARQQLNLQFGTRDLSGFGVEQAPLALRAAGCL
LQYAKDTQRTMLPHIRAITMERQQDGIIMDAATRRNLELTQNLAGGQENTLAAVLDASVTAMGSRMIKRWLHMPIRDRQA
LQRRQDAIEALLPLIDELQPLLRQVGDLERILARLALRSARPRDLARMRVAFQQLPTLQTLLGERGGEALAPLARQAGRF
DALCELLERALVDTPPVLVRDGGVIASGYHAELDEWRALADGASDYLDRLEIREREKLGLDTLKVGFNAVHGYYIQVSRG
QSHLVPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYDELFDLLLPHLAELQQSATALAELDVLSGLAE
RADRYGYVRPQLSERAGINIEEGRHPVVEQVLKEPFIANPLTLSSARRMLVITGPNMGGKSTYMRQAALIVLMAHIGSFV
PAQRAVIGPVDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLVLMDEIGRGTSTYDGLSLAWACAESLASRIK
AMTLFATHYFELTTLPEKLEGVYNVHLDALEHGETIAFMHSVQDGAASKSYGLAVAALAGVPREVIKRARQKLRELETLS
QHGSQSQADSAQLPLLVEAEPSAALEALTAIDPDALTPRQALDWLYRLKGML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 76

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAC_13830 YP_007630247.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 80