Gene Information

Name : smpB (ETAC_13250)
Accession : YP_007630131.1
Strain : Edwardsiella tarda C07-087
Genome accession: NC_020796
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2978543 - 2979025 bp
Length : 483 bp
Strand : +
Note : COG0691 tmRNA-binding protein

DNA sequence :
ATGACAAAGAAAAAAGCACATAAACCGGGTTCGGCAACCATTGCCATGAACAAGCGCGCGCGCCACGAATACTTCATCGA
GGATGAGTTCGAGGCCGGGCTGTCGCTGCAAGGCTGGGAAGTAAAGTCCCTGCGGGCCGGCAAGGCCAACATCAGCGAAA
GCTATATTCTGCTGCAAAACGGCGAGGCGTTTCTGTTTGGCGCCACCTTTACTCCGCTGAGCGTGGCCTCTAGCCACGTG
GTGTGCGATCCGACGCGCACCCGTAAGCTGCTGCTCAAGGAGCGCGAGCTGGCGACCCTGTTCGGCAGCGCCAACCGCGA
CGGTTACACCATCGTCCCGCTGTCGCTGTACTGGAAGAACGCCTGGGCTAAGCTGAAGATCGGCGTGGCTAAGGGCAAGA
AAGAACACGATAAACGCGATGATATCAAGGCGCGTGAATGGCAGCAGGATAAAGCGCGAATTATGAAAAACGCCGGCCGC
TAA

Protein sequence :
MTKKKAHKPGSATIAMNKRARHEYFIEDEFEAGLSLQGWEVKSLRAGKANISESYILLQNGEAFLFGATFTPLSVASSHV
VCDPTRTRKLLLKERELATLFGSANRDGYTIVPLSLYWKNAWAKLKIGVAKGKKEHDKRDDIKAREWQQDKARIMKNAGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 1e-42 67
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 3e-17 42