Gene Information

Name : ETAC_12860 (ETAC_12860)
Accession : YP_007630053.1
Strain : Edwardsiella tarda C07-087
Genome accession: NC_020796
Putative virulence/resistance : Virulence
Product : Co-activator of prophage gene expression IbrB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2896946 - 2897575 bp
Length : 630 bp
Strand : -
Note : COG1475 Predicted transcriptional regulators

DNA sequence :
ATGACCCTAGAAGCCCTAGAGCAGGCGCTGATCGATCTGCTGGAGTCCCAGTCGACGACGGCGCAGCGCATCGCGCTGCT
TAATCGGCTGCGGACGCTGCTGCATCGCTACAGTCCCTTTGCCGATGAGCCGGTGGACTGCGTGCTGTGGATCGCCAACG
AACGGATTGAGGCCAATGACTATAACCCCAACGTGATGGCGCCGGTGGAAAAACGGCTGCTGCAGCGTTCGCTGGCTTCG
GACGGCTATACCCAGCCGGTGGTGGCGGTGGCGCAGGGAGAGCGCTACGTGGTGATCGACGGTTTTCACCGTTACCTTCT
GGGCCGTAAGAACGTGGCGCTACGCCAGCGACTGCAGGGCTATCTGCCGGTGACGCTGCTGGTCAGCGCGAGTGAGGATG
CGGCGGCGCGCATTGCGGCCACGATCCGCCATAACCGCGCGCGCGGCAAGCACCAGATCGCGCCGATGTCCGATATCGTC
CGCGATCTGCACCGCCTGGGCTGGGATGAGGGGCGCATCGGCGAAGAGCTGGGCATGGACGCCGATGAGGTGCTGCGGCT
CAAGCAGATCAGCGGACTGGCGGAGCTGTTTGCTGACGAGGGCTACAGCCAGGGATGGACGGTGGATTAG

Protein sequence :
MTLEALEQALIDLLESQSTTAQRIALLNRLRTLLHRYSPFADEPVDCVLWIANERIEANDYNPNVMAPVEKRLLQRSLAS
DGYTQPVVAVAQGERYVVIDGFHRYLLGRKNVALRQRLQGYLPVTLLVSASEDAAARIAATIRHNRARGKHQIAPMSDIV
RDLHRLGWDEGRIGEELGMDADEVLRLKQISGLAELFADEGYSQGWTVD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4584 NP_458668.1 conserved hypothetical protein Not tested SPI-7 Protein 5e-47 62
t4278 NP_807876.2 hypothetical protein Not tested SPI-7 Protein 4e-47 62
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 2e-51 59
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 6e-49 58
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 9e-50 58
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 9e-50 58
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 6e-49 58
ORF_30 AAZ04440.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-37 56
APECO1_3503 YP_854305.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-37 56
c5208 NP_757056.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-37 56
M5005_Spy_0164 YP_281528.1 parB-like nuclease Not tested Not named Protein 3e-24 48
ef0120 AAM75321.1 EF0120 Not tested Not named Protein 3e-25 41
EF0607 NP_814365.1 ParB-like nuclease domain-containing protein Not tested Not named Protein 4e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAC_12860 YP_007630053.1 Co-activator of prophage gene expression IbrB VFG1505 Protein 1e-51 59