Gene Information

Name : cadB (ETAC_01200)
Accession : YP_007627733.1
Strain : Edwardsiella tarda C07-087
Genome accession: NC_020796
Putative virulence/resistance : Virulence
Product : lysine/cadaverine antiporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 286930 - 288249 bp
Length : 1320 bp
Strand : +
Note : COG0531 Amino acid transporters

DNA sequence :
ATGGCTTCTGTAAAAAAAATCGGGCTTATCGCCTGTACCGGGGTGGTTGCCGGGAACATGATGGGCAGCGGTATCGCGCT
GCTGCCCGCCAACCTGGCAAGCCTAGGGTCAATTGCCGTATGGGGCTGGCTGATCGCGCTGGTGGGCGCCGTTTCTCTGG
CCTATGTGTATGCCCGACTGGCCACCAAAAACCCCCAGGAGGGTGGTCCGGTTGCCTACGCCGGTGAGGTCGGTGCCGCC
TTCGGGTTCCAGACCGGGGTGCTGTACTACCACGCCAACTGGATCGGTAACCTGGCTATCGGTATTACCGCCGTCTCTTA
TTTATCGACCTTCTTCCCGGTGCTTAACAGCCCGGTACCGGCGGGTATCGCCTGTATCGCTATCGTGTGGATTTTCACCT
TCGTTAACATGCTGGGGGGCGCCTGGGTCAGCCGCCTGACCACCTTGGGGCTGGTGTTGGTACTGATCCCGGTTATCGGG
ACCGGGATCGCCGGCTGGTTCTGGTTTGAGCCAACGACCTATATGGCGAACTGGAACACCTCCGGCGGCACGGATTATCA
CGCTATTATTAAAAGTATTCTGCTCTGCCTGTGGGCGTTTATCGGGGTGGAGTCTGCGTCCGTCAGTACCGGGATGGTGA
AGGATCCGCAGCGTAACGTCCCGCTGGCAACCATGATGGGGACTTTCCTGGCCGGTATCGTCTATATTGCGGCGACGCAG
GCTATCGCCGGGATGTATCCGGCCCATCAGATGGCCGCCTCCGGCGCGCCGTTCGCCATCAGCGCCTCGACCATGGTGGG
CAGCTGGGCTGGCCCGGTAGTGTCCGCCTTCACCGCCTTCGCCTGTCTGACGTCGTTGGGCTCCTGGATGATGCTGGTCG
GTCAGGCCGGCGCGCGTGCGGCCCATGACGGTAACTTCCCGAAAATCTACGGTGAGCTGGACAAGAATGGCCTGCCGAAG
AAAGGGCTGTTCCTGGCCGCGCTCAAGATGACCGTTCTGATGGTGCTGATCACCGTGATGAACGCCAGCGGCGGTAAGGC
CTCTGACCTGTTCGGCGAACTGACCGGCATCGCGGTGCTGTTGACCATGCTGCCTTACTTCTACTCCTGTATTGACCTGA
TCCGCTTTGATGGAGCCAACATCAAGAACGTACTGAGTCTGCTGGCGTCCATTCTCGGCTGTGTGTTCTGCTTTATCGCT
TTGATGGGGGCCAACTCGATCGAGCTGTCCGGTACCTTTATCGTCAGCCTGATCATTCTGATGTTCTACTCACGTAAGCT
GGGCTCCGCACAGGATAAAGGCAGCGCCCCGCGTACTTAA

Protein sequence :
MASVKKIGLIACTGVVAGNMMGSGIALLPANLASLGSIAVWGWLIALVGAVSLAYVYARLATKNPQEGGPVAYAGEVGAA
FGFQTGVLYYHANWIGNLAIGITAVSYLSTFFPVLNSPVPAGIACIAIVWIFTFVNMLGGAWVSRLTTLGLVLVLIPVIG
TGIAGWFWFEPTTYMANWNTSGGTDYHAIIKSILLCLWAFIGVESASVSTGMVKDPQRNVPLATMMGTFLAGIVYIAATQ
AIAGMYPAHQMAASGAPFAISASTMVGSWAGPVVSAFTAFACLTSLGSWMMLVGQAGARAAHDGNFPKIYGELDKNGLPK
KGLFLAALKMTVLMVLITVMNASGGKASDLFGELTGIAVLLTMLPYFYSCIDLIRFDGANIKNVLSLLASILGCVFCFIA
LMGANSIELSGTFIVSLIILMFYSRKLGSAQDKGSAPRT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadB NP_756989.1 lysine/cadaverine antiporter Not tested PAI II CFT073 Protein 9e-156 80
cadB AAL67382.1 cadaverine/lysine antiporter Not tested PAI II CFT073 Protein 7e-156 80
unnamed CAD66196.1 putative lysin/cadaverin transporter Virulence PAI III 536 Protein 6e-134 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cadB YP_007627733.1 lysine/cadaverine antiporter VFG1671 Protein 4e-134 67