Gene Information

Name : ETAC_12490 (ETAC_12490)
Accession : YP_007629979.1
Strain : Edwardsiella tarda C07-087
Genome accession: NC_020796
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2812476 - 2813429 bp
Length : 954 bp
Strand : -
Note : COG1683 Uncharacterized conserved protein

DNA sequence : 
ATGTCTTCTGCCATTCCCGTCGGGATCAGCGCCTGCCTGCTCGGTCAGACGGTGCGCTTTGACGGCGGTCACCGGCGCTT
TGCCTTCGCCGCCGATACCCTGGCGCCGTTTTTCCACTTCCTGCCGCTGTGCCCCGAGATGGGCATCGGCCTGCCGTCGC
CGCGCCCAGCGCTGCGCCTGATTCGCCACGATGCGTCGTCGTCGGTGGCGCTGGTCAACAGCCGGGATCCGACGCTGGAC
TATACGGCGGCGATGGAGGATTTCGCTGCGCGTCAGCTGCCGCAGCTGCAGTCGCTGTGCGGGTTTATCCTCTGCGCCCG
CTCGCCCAGCTGCGGCATGGAGCGGGTGAAGGTGTATACGCCGCACGAGGCGCGTAAAAACGGAGTGGGATTGTTCGCCG
CCGCCCTGATGACGGCGATGCCCTGGCTGCCGGTCGAGGAGGATGGGCGCCTGAGCGACGGCGCGCTGCGGGAGAACTTT
ATTGCCCGAGTATACGCGCTGCACGAGTTTAACCAACTGTGGCAGTCGGGGCTGAGCCGCGGGGCGCTGGTGGCGTTCCA
CAGCCGCTATAAGCTGCTGTTGCTGGCCCACTCTCAGCCCGCCTACCGCGCGCTGGGGCGGATGGTGGCGGAGATAGGCC
AGTGGCCTTCGACGACGGCGTTTGCCACAGAATACCGTCATCGGCTGATGGCGCTGATGCGACAGCCCGCCTCACGCCGT
AACCATACCAATGTGCTGCAGCACGTACAGGGCTACTTCAGCCCACGCCTCAATCCTGCTCAGCGTGCCGAGCTGAGCCA
GCTGATCCTACAGTATCGCCAGGGGGTACAGCCCCTGCTGGCGCCGCTGACGCTGATCAACCACTACCTGCGGGAGTACC
CGGACGATTACCTGGCGTCGCAGCGCTATTTCTCCCCCTATCCGGACGCTCTGCGTCTGCGCTATGGCCATTAG

Protein sequence : 
MSSAIPVGISACLLGQTVRFDGGHRRFAFAADTLAPFFHFLPLCPEMGIGLPSPRPALRLIRHDASSSVALVNSRDPTLD
YTAAMEDFAARQLPQLQSLCGFILCARSPSCGMERVKVYTPHEARKNGVGLFAAALMTAMPWLPVEEDGRLSDGALRENF
IARVYALHEFNQLWQSGLSRGALVAFHSRYKLLLLAHSQPAYRALGRMVAEIGQWPSTTAFATEYRHRLMALMRQPASRR
NHTNVLQHVQGYFSPRLNPAQRAELSQLILQYRQGVQPLLAPLTLINHYLREYPDDYLASQRYFSPYPDALRLRYGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 7e-88 58
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 5e-88 58
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 3e-88 58
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 3e-88 58
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 7e-88 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAC_12490 YP_007629979.1 hypothetical protein VFG0490 Protein 2e-88 58