Gene Information

Name : ETAC_11535 (ETAC_11535)
Accession : YP_007629788.1
Strain : Edwardsiella tarda C07-087
Genome accession: NC_020796
Putative virulence/resistance : Virulence
Product : type VI secretion system protein EvpH
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2614501 - 2617080 bp
Length : 2580 bp
Strand : +
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGAACCAGACCTGCCATCAGGCGCTGGAGGCAGCGGCGGGCCTGTGCCTGGCGCGGGGCCATCACGAGGTCGATATCGA
GCACGTGCTGCTCAAGCTGCTGGAGACCGACAACACGGATCTGGCGCGCCTGCTGCAGCACTATGGGGTCGACGCCGGCC
GTTTTCAGCGGGACATTGAGCGGGCGCTGGATCGCCTGAAGGGCGGATGCAGCCGGCAGCCGGTGCTCTCCCCCCACCTG
CCGCGGCTGCTGTCTGGTGCCTGGCTGATGGCCTCCGTCAACTGTGGCGAGAGCCAGATCCGCAGCGGTCATCTGATCAT
GGCGCTGCTGGATGACGCGGTGCTGCAGCAGCTCGCCAGGGCGATGTCGCCCGAGTGGGCGGCGTGGTCAGCGGCAGATC
TGCTGCACCAGTGGCCCGCGCTGGTCGCGGGCAGTCGAGAGGCGACGACGATGAGCACGCCGGGGCCGCACGCGGGTGCA
TCTCCCTCGCCCGCCCTGGATCAATACACGGTAAACCTGAGCGAGCGGGCCCGCCAGGGCCAGCTGGACCCGGTTCTCGG
GCGGGATAGCGAGATTCGGCAGATGATCGATATTTTGCTGCGCCGCAGGCAGAACAACCCGATTCTTACCGGTGAGGCCG
GCGTAGGGAAAACCGCCGTGGTTGAGGGGCTGGCCCTGCGCATTGCGGCCGGCGAGGTGCCGGATAGCCTGCGCAGCGTT
GCCCTGCGGATGCTGGATCTGGGCCTGCTGCAGGCGGGCGCCAGCGTCAAGGGTGAGTTCGAGCGGCGTCTCAAGGCGGT
CATCGACGAGGTGAAGGCCTGCAGTGAGCCGGTCATCTTGTTCATCGATGAAGCCCATACGCTGATCGGCGCGGGAGGCG
CGGCGGGTCAGAATGATGCCGCCAATCTGCTGAAGCCGGCGCTGGCCCGCGGTGAGCTGCGCACCATTGCCGCCACCACC
TGGAGCGAGTACAAAAAATATTTCGAGAAAGATCCCGCCCTGGCGCGGCGCTTCCAGGCCATCAAGGTGGAGGAGCCCAG
CGAGGAGATCGCCATGGTGATGCTGCGCGGCATGCTGACCAAAATGCGCCAGCACCACCAGGTCCGGATTCTGGATGAGG
CGGTGACGGCCGCCGTCAGGCTGTCACACCGCTATTTGACCGGCAGACAGCTGCCGGACAAGGCGGTCAGCGTGCTGGAT
ACCGCCTGCGCCCGCATTGCGCTCGGGCAGCGCACCCTGCCGGCCCCCGTCGAGGATGCCTGCCGCCATCTGGAGCATCT
CCAGACCGAGATCACGCTGCTGGAGCAGGAGCAGGCCAGCGGCCTCGATCATGGTCGCCGCCTGGAGACGCTGCAGGAGC
AGGCCCGGGTCGCCCGGGAGCACTATCAGACCCTGGAGCAGCGCTGGATCGCGGAGTGTGATCAGGTCGCCGTCATTCAG
GCGCTGCAAGCGCAGCTGGAGCAGGAGGATGGCCCGGCGCGCGCTGAGGGGCTGACCCAGCTGGAGCAGGCCGTTTTGGC
GCTTGAGCAGATGCAGGGCCGGGCGCCGCTGGTGCAGACCTGTGTGGATGAGTCCGCCATTGCGGCGGTGATCTCGGCAT
GGACGGGGATTCCGCTGGGCAAGATGGTTCAGGATGAGCTGGAGATGGTTCGCCAGCTGCAGACGCGGCTGGCCGAGCGG
GTCATCGGGCAGCCCTATGCCCTGGAGACCATCGCCCGGGGGATTCGCCTGTCCCGCGCGGGGCTCGAGGATCCCAACAA
GCCCATCGGCGTGTTTCTGCTGGTCGGCTCCAGCGGTGTAGGAAAGACCGAGACCGCGCTGGCGCTGGCCGAAACCCTGT
ATGGCGGCGAGCGCAACCTGATCACCATCAACCTGTCGGAGTTTCAGGAGGCCCATACCGTTTCGACGCTGCGGGGCTCG
CCGCCGGGCTACGTCGGCTACGGAGAGGGCGGCGTGCTGACGGAGGCGGTACGCCGCAAACCCTACAGCGTGGTGCTGCT
GGATGAGGTGGAGAAAGCCCACCCGGATGTCCTGGAGCTGTTCTTCCAGGTGTTTGACAAGGGGGTCATGGACGATGCCG
AGGGGCGGGAGATCAACTTCCGCAATACCGTCATACTGCTGACCTCCAACGTCGGCAGCGACACCCTGATGGCCTACTGT
CAGGACGGCATGACGCCGCCCGAACCGGCGCTGCTGTGTGAGGCGCTGCGGGATGAGCTGATCCAGACCTTCAAGCCGGC
CTTCCTCGGACGCCTGCAGGTAGTGCCCTACTACCCGGTGCGGGGCGCGGTGCTAAAACAGATTATCCGCCTCAAGCTGG
ATAAGATTGCCCGCCGCTTCCAGCGCAATCATCAGGCCACCTTCCATTACGATGAGGCCCTGGTGGAGGGCATCGCCGAG
CGCTGTACCCAGCCGGAGAGCGGCGCCCGCCTGATCGATAACATTCTGTCGGCCCAGCTGCTGTCCGATATGGCGGACGC
GGTGCTGGCGCGCATGGCCGCCGGTGAGCCGGTGTCCGATATCACCGTCTCAATGGATGAGCACGGCCGACTGACGGGAT
CGTTAGAGGGGAGTGACTGA

Protein sequence :
MNQTCHQALEAAAGLCLARGHHEVDIEHVLLKLLETDNTDLARLLQHYGVDAGRFQRDIERALDRLKGGCSRQPVLSPHL
PRLLSGAWLMASVNCGESQIRSGHLIMALLDDAVLQQLARAMSPEWAAWSAADLLHQWPALVAGSREATTMSTPGPHAGA
SPSPALDQYTVNLSERARQGQLDPVLGRDSEIRQMIDILLRRRQNNPILTGEAGVGKTAVVEGLALRIAAGEVPDSLRSV
ALRMLDLGLLQAGASVKGEFERRLKAVIDEVKACSEPVILFIDEAHTLIGAGGAAGQNDAANLLKPALARGELRTIAATT
WSEYKKYFEKDPALARRFQAIKVEEPSEEIAMVMLRGMLTKMRQHHQVRILDEAVTAAVRLSHRYLTGRQLPDKAVSVLD
TACARIALGQRTLPAPVEDACRHLEHLQTEITLLEQEQASGLDHGRRLETLQEQARVAREHYQTLEQRWIAECDQVAVIQ
ALQAQLEQEDGPARAEGLTQLEQAVLALEQMQGRAPLVQTCVDESAIAAVISAWTGIPLGKMVQDELEMVRQLQTRLAER
VIGQPYALETIARGIRLSRAGLEDPNKPIGVFLLVGSSGVGKTETALALAETLYGGERNLITINLSEFQEAHTVSTLRGS
PPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVLELFFQVFDKGVMDDAEGREINFRNTVILLTSNVGSDTLMAYC
QDGMTPPEPALLCEALRDELIQTFKPAFLGRLQVVPYYPVRGAVLKQIIRLKLDKIARRFQRNHQATFHYDEALVEGIAE
RCTQPESGARLIDNILSAQLLSDMADAVLARMAAGEPVSDITVSMDEHGRLTGSLEGSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 7e-148 48
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 2e-126 42
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 3e-126 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAC_11535 YP_007629788.1 type VI secretion system protein EvpH VFG2076 Protein 0.0 51
ETAC_11535 YP_007629788.1 type VI secretion system protein EvpH VFG2084 Protein 5e-143 46