Gene Information

Name : ETAC_10690 (ETAC_10690)
Accession : YP_007629619.1
Strain : Edwardsiella tarda C07-087
Genome accession: NC_020796
Putative virulence/resistance : Virulence
Product : P pilus assembly protein, pilin FimA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2423426 - 2423953 bp
Length : 528 bp
Strand : -
Note : -

DNA sequence : 
ATGAAGACGTTGTTTTTTAAAGCAGCTGGAGCCATGACCATCGCATTGGTAACGTTTGGTACCCAAGCAGCGAGTGGGCA
AGGTGTTGTAAATTTTAGTGGTACTGTCATTACCGCACCGTGTGGTATTTCTCCTGAATCTGCCGATCAATCGATTGATT
TTGGCCAGATCTCGAAAAGTCACCTCGAGGCTGGTGGTATTTCTGTGAAGAAAAATCTCGATATTAAATTGGTTGGTTGC
GATGCGACCGCATTGGCTCAGACCGGCAGTGCCAATGTAACATTCACCGGCGTTACAATTACCGGTGCTCCTACCGAACT
GGGAACGACGGGCTCAACGGGAACTGCCATTGTTATCTCTAGCGAAGATGGCAGTTTAGTTTCATTTGGTAATGCAGGGT
CTGCGCAAAAACTGAAGGTTGGCGATAATCTGCTGCGTTATTCTGCATGGGTCAAAACGGCTACTGGTGGTACGTTGGCT
GAGGGTGACTTTGCATCTGTAGCTAACTTTAATATTACCTATCAATAA

Protein sequence : 
MKTLFFKAAGAMTIALVTFGTQAASGQGVVNFSGTVITAPCGISPESADQSIDFGQISKSHLEAGGISVKKNLDIKLVGC
DATALAQTGSANVTFTGVTITGAPTELGTTGSTGTAIVISSEDGSLVSFGNAGSAQKLKVGDNLLRYSAWVKTATGGTLA
EGDFASVANFNITYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pixA CAE85161.1 PixA protein Not tested PAI V 536 Protein 1e-41 57
papA AAZ04426.1 major fibrial protein Virulence PAI I APEC-O1 Protein 1e-35 54
papA YP_854256.1 major fibrial protein Virulence PAI I APEC-O1 Protein 2e-35 54
papA YP_002414017.1 P-fimbriae major subunit Not tested Not named Protein 5e-29 49
papA AAC61718.1 PapA Virulence PAI I CFT073 Protein 1e-17 49
papA AAL67417.1 PapA Virulence PAI II CFT073 Protein 5e-31 47
papA_2 NP_757036.1 PapA protein Virulence PAI II CFT073 Protein 8e-31 47
papA NP_755467.1 PapA protein Virulence PAI I CFT073 Protein 9e-26 45
prfA CAD42031.1 PrfA protein Virulence PAI II 536 Protein 5e-27 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAC_10690 YP_007629619.1 P pilus assembly protein, pilin FimA VFG0893 Protein 2e-31 47
ETAC_10690 YP_007629619.1 P pilus assembly protein, pilin FimA VFG0882 Protein 3e-26 45
ETAC_10690 YP_007629619.1 P pilus assembly protein, pilin FimA VFG1550 Protein 2e-27 44