Gene Information

Name : ETAC_10685 (ETAC_10685)
Accession : YP_007629618.1
Strain : Edwardsiella tarda C07-087
Genome accession: NC_020796
Putative virulence/resistance : Virulence
Product : minor pilin subunit PapH
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2422767 - 2423354 bp
Length : 588 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAAAGTGATTGTATTCTTAGGTTTTATACTGAGCAGTATTAATGCTCAAGCCGGTACATCCACTGTTTTTCCGGC
GCCAGGAATGTCATTGCCCGAGTATTGGGGAGAACGCGATGTATGGTGGCATGGACGAGCTCACTTTTCCGGTCAAGTAA
TTGCACCAGCCTGCAGCCTGGCGATGGAGGATACTTATCAGGCTATCTCTATGGGCGATACACCAGTCCGAGAACTGCAG
GATACATTTATCGGGCCAGAGAAAAAATTTCGTTTACGTTTGCGTAACTGTGAGCTAGCAGGCAGCGGTAATAACATATT
TATTGGTAGCAGAATTAGAGTAACGTTTAGCGGACGTGAGGGGGAGAGTCGCGATAAGTTTTCTGTAATTGGTCAGGCGC
AGGGGATTAATTTACAGATAGCTGATAGTAGTGGATATCTGGCTAAACCTGGCGAGGTGATGCGCCCTATGCTATTAAAT
GGGAATGAACAAAGTTTGGATTATACATTACGCCTGGTTAGAAATGGGAAGCCATTACAGGCTGGTGACTATTATGCCGT
GCTAAGGTTTAAGGTTGACTACGAATAA

Protein sequence : 
MKKVIVFLGFILSSINAQAGTSTVFPAPGMSLPEYWGERDVWWHGRAHFSGQVIAPACSLAMEDTYQAISMGDTPVRELQ
DTFIGPEKKFRLRLRNCELAGSGNNIFIGSRIRVTFSGREGESRDKFSVIGQAQGINLQIADSSGYLAKPGEVMRPMLLN
GNEQSLDYTLRLVRNGKPLQAGDYYAVLRFKVDYE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pixH CAE85160.1 PixH protein Not tested PAI V 536 Protein 4e-60 62
prfH CAD42030.1 PrfH protein Virulence PAI II 536 Protein 1e-56 62
papH AAZ04425.1 fimbrial regulatory protein Virulence PAI I APEC-O1 Protein 3e-57 61
papH YP_854255.1 minor pilin subunit PapH Virulence PAI I APEC-O1 Protein 4e-57 61
papH YP_002414016.1 minor pilin protein PapH Not tested Not named Protein 3e-56 61
papH NP_755466.1 PapH protein Virulence PAI I CFT073 Protein 1e-56 61
papH_2 NP_757035.1 PapH protein Virulence PAI II CFT073 Protein 1e-56 61
papH AAL67416.1 PapH Virulence PAI II CFT073 Protein 7e-57 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAC_10685 YP_007629618.1 minor pilin subunit PapH VFG1549 Protein 6e-57 62
ETAC_10685 YP_007629618.1 minor pilin subunit PapH VFG0894 Protein 3e-57 61
ETAC_10685 YP_007629618.1 minor pilin subunit PapH VFG0883 Protein 3e-57 61