Gene Information

Name : ETAC_10670 (ETAC_10670)
Accession : YP_007629615.1
Strain : Edwardsiella tarda C07-087
Genome accession: NC_020796
Putative virulence/resistance : Virulence
Product : pilus assembly protein PapK
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2418049 - 2418639 bp
Length : 591 bp
Strand : -
Note : COG3539 P pilus assembly protein, pilin FimA

DNA sequence : 
ATGAATAAACTATCGCAACCGATGCAGCAGATAAAGAGAGTTAGATATGTTCTTTATAGCATTGGCATTGTACTGCTCTT
AGGTAGGGCGGGCCATGTTAATGCGGTCGATATGAACTTCTCCGGAGAACTATTAGAGCGTCCGTGTGAAATCAGTCAAG
AAAGCTTGGCCCAGGAGGTGGGGTTTTTGACGCGTCCAACCCGTGATTTTTGGATCTCTCCGGGGAAGGGACCTGCGACC
GGATTTAGTATAAAACTGATCAACTGTAATACGGCATCTATTGCTAGAGTGGTAAAGCTAAAGTTCAGCGGAACGAGAGA
GCCGAATATGCTAGGGCAAGCCGATTATTTTCTGAGAGTTAATGGGGTTAATCAGGGTAGGCTTGCCATCGGTATATTAG
ATACGGATGGGAAAATGCTGCTGAAGATTGGTGATGTACATAACCACCAACAAGGAAGTCGTATTGATGAAAATACAATT
TTGTTGAGCTTTAAGGCTTTTGTTCAGGCAACGCCTGACGCGGTGAGGCAAAAAAACGTTTCTCCTGGTGATTACTCATC
CGTAGCAGGATTTGAGCTTTTTTATGAGTAA

Protein sequence : 
MNKLSQPMQQIKRVRYVLYSIGIVLLLGRAGHVNAVDMNFSGELLERPCEISQESLAQEVGFLTRPTRDFWISPGKGPAT
GFSIKLINCNTASIARVVKLKFSGTREPNMLGQADYFLRVNGVNQGRLAIGILDTDGKMLLKIGDVHNHQQGSRIDENTI
LLSFKAFVQATPDAVRQKNVSPGDYSSVAGFELFYE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
papK AAL67411.1 PapK Virulence PAI II CFT073 Protein 3e-40 48
prfK CAD42026.1 PrfK protein Virulence PAI II 536 Protein 2e-40 48
papK AAZ04421.1 P pilus protein Virulence PAI I APEC-O1 Protein 9e-41 48
papK YP_854251.1 pilus assembly protein PapK Virulence PAI I APEC-O1 Protein 1e-40 48
papK NP_755461.1 PapK protein Virulence PAI I CFT073 Protein 3e-40 48
papK_2 NP_757030.1 PapK protein Virulence PAI II CFT073 Protein 3e-40 48
papK YP_002414012.1 Fimbrial adapter PapK Not tested Not named Protein 3e-40 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAC_10670 YP_007629615.1 pilus assembly protein PapK VFG1545 Protein 8e-41 48
ETAC_10670 YP_007629615.1 pilus assembly protein PapK VFG0887 Protein 9e-41 48
ETAC_10670 YP_007629615.1 pilus assembly protein PapK VFG0898 Protein 9e-41 48