Gene Information

Name : ETAC_10655 (ETAC_10655)
Accession : YP_007629612.1
Strain : Edwardsiella tarda C07-087
Genome accession: NC_020796
Putative virulence/resistance : Virulence
Product : major pilu subunit operon regulatory protein PapB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2414596 - 2414898 bp
Length : 303 bp
Strand : -
Note : -

DNA sequence : 
ATGAACGGAAATCGGCTATCTAACAGAAAACATATAGATCGGTTTTTATATCCTGGAAAAGTTTCTATTGAACATTTTGA
AATGCTAATTGAGTTAAGTGGTATTCGTAGTAAACGTGTGATAATGGCATTGGAAAGATATTTGGTTGGCGGTGAAAAAA
GAAAAACATTATGTGAGGCTAATTCGGTGAGTCTCTCCTATTTCTCAGTAAAACTTAAACAGTTGCATAACTGCAGCGTT
TTAGTGATGAAGTTATGCCCATACTATGATTTTTCTTTAATAAAAAATAAAAGTGGGAAATAG

Protein sequence : 
MNGNRLSNRKHIDRFLYPGKVSIEHFEMLIELSGIRSKRVIMALERYLVGGEKRKTLCEANSVSLSYFSVKLKQLHNCSV
LVMKLCPYYDFSLIKNKSGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pixB CAE85162.1 PixB protein Not tested PAI V 536 Protein 2e-11 46
papB AAZ04473.1 P pilus protein Virulence PAI I APEC-O1 Protein 1e-11 45
prfB CAD42032.1 PrfB protein Virulence PAI II 536 Protein 3e-12 45
APECO1_3518 YP_854257.1 PapB-like protein Virulence PAI I APEC-O1 Protein 2e-11 45
papB YP_002414018.1 pap operon regulatory protein PapB Not tested Not named Protein 2e-11 45
papB AAC61719.1 PapB Virulence PAI I CFT073 Protein 1e-11 45
papB AAL67418.1 PapB Virulence PAI II CFT073 Protein 1e-11 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAC_10655 YP_007629612.1 major pilu subunit operon regulatory protein PapB VFG1551 Protein 1e-12 45
ETAC_10655 YP_007629612.1 major pilu subunit operon regulatory protein PapB VFG0436 Protein 4e-10 43