Gene Information

Name : ETAC_09195 (ETAC_09195)
Accession : YP_007629320.1
Strain : Edwardsiella tarda C07-087
Genome accession: NC_020796
Putative virulence/resistance : Virulence
Product : acetoacetate metabolism regulatory protein AtoC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2087494 - 2088879 bp
Length : 1386 bp
Strand : +
Note : COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains

DNA sequence : 
ATGAAAACCCGCAACCGTATTCTCATCGTGGATGACGAAGATAACGTACGCCGCATGCTCACCACCGCGTTGACGCTCCA
GGGGCATGAAACACACACCGCCAGCCACGGGGCCGAGGCGCTGCAGCGCTTTGCCGACGCGCCGCCGGACGTGGTGCTGA
TGGATATCCGTATGCCGACCATGAACGGGATCGACGCCCTGAAAGTCATGCGCGCCCGGCAGCCGCGCACCCCCGTCATT
CTGATGACCGCCTACGCCGAGGTGGAGACCGCCGTCGAGGCGCTGCGCAGCGGCGCATTCGATTATGTGATCAAGCCCTT
CGATCTGGATGAGCTGAACTTACTGATCCAGCGCGCGCTGCAGCTGCAGGCGATGAAGCAGGAGATCCGCAGCCTGCATC
AGGCCCTGAGCACCCGCTGGCAGTGGGGACATATCCTGACCAACAGCCCGCGCATGATGGATATCTGCAAAGACACCGCG
AAAATCGCCCTTTCGCAGGCCAACGTGCTGATCAGCGGGGAGAGCGGAACCGGCAAGGAGCTGATTGCCCGCGCCATTCA
CTACGGCTCGCGGCGCGCAAGCGGCCCCTTTATCAAGGTCAACTGCGCCGCCCTGCCGGAGTCGCTGCTGGAGAGCGAGC
TGTTCGGCCATGAGAAGGGCGCATTCACCGGCGCGCAGACCCAGCGCCAGGGGCTGTTTGAGCGCGCCCATCGGGGCACC
CTGCTGCTGGATGAAATCGGCGAAATGCCGCCGCCGCTGCAGGCCAAGCTGCTGCGGATCCTGCAGGAAAGGGAGTTCGA
GCGCGTGGGGGGACACCAAACCATTCGGGTGGATATCCGCATCGTGGCCGCCACCAACCGGGATTTACAGGCGATGGTGC
GCGAGGGCGGCTTCCGTAACGATCTCTTCTATCGCCTGAACGTCATTCATCTGCCGCTGCCGCCGCTGCGCGAGCGGCGG
CAGGACATCGCCCTGCTCGCCAACCATTTCTTACAAAAGTTCAGCTCGGAGAACCAGCGCGACATGATTGAGATCGATCC
GGCGGCGATGTCGCTGCTCAGCGCCTGGCCCTGGCCGGGCAACATCCGCGAGCTCTCCAACGTCATCGAGCGCGCGGTGG
TGATGAGCACCGGCGCGGTCATTTTTGCCGACGATCTGCCGGCTCCGCTGCACCAGCCCATCGGCGGCGGCGCTGGCGCC
AAAAGCGCCCCGCCCGGCGAGCGCAATCTGAAAGAGGAGATCAAGCGCGAGGAGCGGCGCATCATCAGCGAGGTGCTCGA
ACAGCAGGCGGGAAACCGCACCCGCACCGCCCTGATGCTGGGTATCAGCCGCCGCGCCCTGATGTACAAGCTGCAGGAGT
ACGGCATCGATCCGGCCGGGTGCTAG

Protein sequence : 
MKTRNRILIVDDEDNVRRMLTTALTLQGHETHTASHGAEALQRFADAPPDVVLMDIRMPTMNGIDALKVMRARQPRTPVI
LMTAYAEVETAVEALRSGAFDYVIKPFDLDELNLLIQRALQLQAMKQEIRSLHQALSTRWQWGHILTNSPRMMDICKDTA
KIALSQANVLISGESGTGKELIARAIHYGSRRASGPFIKVNCAALPESLLESELFGHEKGAFTGAQTQRQGLFERAHRGT
LLLDEIGEMPPPLQAKLLRILQEREFERVGGHQTIRVDIRIVAATNRDLQAMVREGGFRNDLFYRLNVIHLPLPPLRERR
QDIALLANHFLQKFSSENQRDMIEIDPAAMSLLSAWPWPGNIRELSNVIERAVVMSTGAVIFADDLPAPLHQPIGGGAGA
KSAPPGERNLKEEIKREERRIISEVLEQQAGNRTRTALMLGISRRALMYKLQEYGIDPAGC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 7e-61 44
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 7e-61 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAC_09195 YP_007629320.1 acetoacetate metabolism regulatory protein AtoC BAC0467 Protein 1e-75 47
ETAC_09195 YP_007629320.1 acetoacetate metabolism regulatory protein AtoC BAC0089 Protein 2e-78 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAC_09195 YP_007629320.1 acetoacetate metabolism regulatory protein AtoC VFG1249 Protein 2e-63 46
ETAC_09195 YP_007629320.1 acetoacetate metabolism regulatory protein AtoC VFG0116 Protein 4e-61 44
ETAC_09195 YP_007629320.1 acetoacetate metabolism regulatory protein AtoC VFG1214 Protein 2e-66 42