Gene Information

Name : cadB (ETAC_08620)
Accession : YP_007629205.1
Strain : Edwardsiella tarda C07-087
Genome accession: NC_020796
Putative virulence/resistance : Virulence
Product : lysine/cadaverine antiporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1962450 - 1963724 bp
Length : 1275 bp
Strand : +
Note : COG0531 Amino acid transporters

DNA sequence :
ATGATGGGCAGCGGTATCGCCCTGCTGCCGGCAAACCTCGCCAAAATTGGTTCCATCTCTATTTTTGGTTGGTTAATTGC
CTTGGTCGGTGCAATGTCGCTGGCCTTTGTCTTCGCTCGTTTGACTACACGCGATCCACAGGTAGGCGGCCCTATCGCCT
ACGCAGGCCGTCTGGGCCCAGCCTTTGGCTTCCAGACCGCCGTGCTCTACTATCATGCGAACTGGATCGGTAACCTGGCC
GACTGCCTGGCCGGGGTCGCCTATCTGTCGGTCTTCTTCCCGATGCTCAACGACCCGATACCCGCGGGCATTGCCAGTAT
CGTCATCATCTGGATCATGGCCTTCATTAATATGATGGGCGGAACCTGGGTGAGCCGCCTGACGACCCTGGGGCTGATCC
TGGTGCTGATCCCGGTGGTCGGTACCGCCATCGCCGGCTGGCACTGGTTTGATCCGGCGCTGTACCACGCCAACTGGAAC
ACCACCCAGAGCAGCAGCGGCAGCGCCGTACTGCACAGCATTCTGATCTGCCTGTGGGCCTTTGTCGGCGTAGAGAGCGC
CGCGGTCAGCTCCGGGCTGGTGAAGAACGCCAAGCGCACCGTGCCGCTGGCCACCATGCTGGGAACCGCACTGGCTGGCC
TGATCTACATTCTGGCGACCCAGGTAATGAGCGGAATGTTCCCAGCGCAGACCATGGCCAACACCGGCGCCCCCTTCGCC
GCCAGCGCCTCGATGATCCTCGGCCCCTGGGCCGCACCGGTGGTCTCGGCCTTCACCGCCTTCGCCTGTCTGGCCGCCCT
GGGATCGTGGATGATGCTGGTGGGCCAGGCCGGGGTACGCGCCGCCCGCGACGGTAACTTCCCGCGGATCTACGGCGAGG
TTGACGCCCACGGCGTGCCGCGTAAAGGGATCGTGCTGTCGGCGCTGAAGATGACCGCCCTGATGGCGCTGATGACCTTC
TTGGCCGCCAGCGGCGCCAAAACCTCCGACATCTTCGGCGATTTGATCGGTATCGCGGTGCTGTTAACCATGCTGCCCTA
CTTCTACTCCTGCATTGCGCTGATCCGCCTGGAGGGCCCCTCCCTGCACCACGTACTGAGCCTGACGGCCGCCACCCTGG
GCTGCCTGTTCTGCTTTATCGCGTTAAGCGGCGCGGAGTCGGTCAAGCTGGCGCTGACCTTTATCATCAGCCTGAGCATC
CTGATGTTCTACGCCCGCCGCCAGGGCTTTCATGAGAAGGCCTACGCCCGCCTCAATCGGCAGGCGCCGCGCTAA

Protein sequence :
MMGSGIALLPANLAKIGSISIFGWLIALVGAMSLAFVFARLTTRDPQVGGPIAYAGRLGPAFGFQTAVLYYHANWIGNLA
DCLAGVAYLSVFFPMLNDPIPAGIASIVIIWIMAFINMMGGTWVSRLTTLGLILVLIPVVGTAIAGWHWFDPALYHANWN
TTQSSSGSAVLHSILICLWAFVGVESAAVSSGLVKNAKRTVPLATMLGTALAGLIYILATQVMSGMFPAQTMANTGAPFA
ASASMILGPWAAPVVSAFTAFACLAALGSWMMLVGQAGVRAARDGNFPRIYGEVDAHGVPRKGIVLSALKMTALMALMTF
LAASGAKTSDIFGDLIGIAVLLTMLPYFYSCIALIRLEGPSLHHVLSLTAATLGCLFCFIALSGAESVKLALTFIISLSI
LMFYARRQGFHEKAYARLNRQAPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadB NP_756989.1 lysine/cadaverine antiporter Not tested PAI II CFT073 Protein 1e-121 69
cadB AAL67382.1 cadaverine/lysine antiporter Not tested PAI II CFT073 Protein 8e-122 69
unnamed CAD66196.1 putative lysin/cadaverin transporter Virulence PAI III 536 Protein 2e-106 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cadB YP_007629205.1 lysine/cadaverine antiporter VFG1671 Protein 1e-106 63