Gene Information

Name : ETAC_08500 (ETAC_08500)
Accession : YP_007629181.1
Strain : Edwardsiella tarda C07-087
Genome accession: NC_020796
Putative virulence/resistance : Virulence
Product : Thiol peroxidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1936116 - 1936619 bp
Length : 504 bp
Strand : +
Note : COG2077 Peroxiredoxin

DNA sequence :
ATGACGCAGACTGTTTTATTCCGTGGCACACCGGTCACGCTCGACGGTCACTTTCCACGCCCCGGCGAAGCGGCGCAGCC
GTTCTCCCTGGTGTCGAAAGATCTGGCAGATCTGACCCTGGCCAGCTTCGGTCAGCAGCGTAAAATTCTCAATATTTTCC
CCAGCATTGACACCGGAGTCTGCGCCACCTCGGTGCGGCGCTTCAACCAGCTGGCCGCCGAGGCCACTAACGCCGTCGTG
CTGTGCATCTCCGCCGACCTGCCTTTCGCCCAGGCACGCTTCTGCGGCGCCGAAGGGTTGAATAACGTGATTACCCTCTC
CACCCTGCGCGGCGGCGAGTTCAAGCAGGCGTATGGCGTGGCGATTGCGGAGGGACCGCTGGCCGGACTGACGGCGCGGG
CAGTGGTGATATTGGATGGTGAGAATCGGGTGATTTACAGCCAGTTGGTGGCGGAGATCGCCGACGAGCCAGACTACGAG
GCCGCCCTGGCCGCGCTGAAGTAA

Protein sequence :
MTQTVLFRGTPVTLDGHFPRPGEAAQPFSLVSKDLADLTLASFGQQRKILNIFPSIDTGVCATSVRRFNQLAAEATNAVV
LCISADLPFAQARFCGAEGLNNVITLSTLRGGEFKQAYGVAIAEGPLAGLTARAVVILDGENRVIYSQLVAEIADEPDYE
AALAALK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 3e-32 42
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 3e-32 42
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 2e-32 42
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 2e-32 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAC_08500 YP_007629181.1 Thiol peroxidase VFG0087 Protein 8e-33 42