Gene Information

Name : ETAC_08265 (ETAC_08265)
Accession : YP_007629134.1
Strain : Edwardsiella tarda C07-087
Genome accession: NC_020796
Putative virulence/resistance : Virulence
Product : Hemin ABC transporter, permease protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1882380 - 1883381 bp
Length : 1002 bp
Strand : +
Note : COG0609 ABC-type Fe3+-siderophore transport system, permease component

DNA sequence : 
ATGATCCGCCGCTCACCGCGCCTGACGCTGGGGCTGCTGCTGGGTCTATTGATGTTGACCACCCTGGTCGCCGCTCACCT
GGGCGCACTGCGCCTGTCGCCCGTCGCGCTGCTGCGCGACGGCGATCCCCTTCAGTGGCAGATCTGGCTCAACATCCGCC
TGCCGCGGGTGCTGCTGGCGGTGGTTATCGGCATTGCGCTGGCCGTCTCCGGCACCGTTATGCAGGGGCTGTTCCGCAAC
CCGCTGGCCGATCCCGCCCTGCTGGGGATCAGCAGCGGCGCGGCGCTGTGCGTGGCGCTGACCATCGTGCTCCCGCTGGC
GCTCTCGCCGCTGCTGGCGCTGTATGCCCAAATGCTGGCGGCGTTTGGCGGTAGCCTGGCCATTTCGCTGCTGATTTATC
TATTAAGCCGCGGCGCATCGGTGACACTGTCACGATTGCTGCTCGCCGGGATCGCCATTAACGCCCTCTGCTTTGCCCTG
GTCGGGGTACTGAGCTACCTGAGCGACGATCAGCAGCTGCGTCAGTTCACCCTGTGGAGCATGGGAACCCTGTCGCGCAG
CGAATGGCACACGCTGGGCGCCAGCGCCCTGCTGATCCTGCCGGCCAGCCTGTTCGCGCTCACGCTGGCCCAGCGCCTGA
ACCTGCTGCAGCTGGGCGATGAAGAGGCCCACTACCTTGGGCTCGACGTGGCGCGCACCAAGCGCCAGCTCTTGCTGCTC
AGCGCCGTACTGGTCGGCAGCGCGGTGGCCGTCAGCGGCGTCATCGGCTTTATTGGCCTGGTGGTTCCCCACCTGTTTCG
CCTGCGGCTCGGCGCCGATCACCGCTGGCTACTGCCCTGCGCGGCGCTGGGCGGCGCCTGCCTGCTGCTGCTGGCCGATA
CCCTGGCCCGCACCCTGGCGGCCCCGGCGGAAATGCCGGTCGGCATGCTGACCAGCCTCCTGGGCGGCCCCTATTTTCTC
TGGCTGATACTGCGCTACCGGGAGGTAAGTCATGGTCAATAA

Protein sequence : 
MIRRSPRLTLGLLLGLLMLTTLVAAHLGALRLSPVALLRDGDPLQWQIWLNIRLPRVLLAVVIGIALAVSGTVMQGLFRN
PLADPALLGISSGAALCVALTIVLPLALSPLLALYAQMLAAFGGSLAISLLIYLLSRGASVTLSRLLLAGIAINALCFAL
VGVLSYLSDDQQLRQFTLWSMGTLSRSEWHTLGASALLILPASLFALTLAQRLNLLQLGDEEAHYLGLDVARTKRQLLLL
SAVLVGSAVAVSGVIGFIGLVVPHLFRLRLGADHRWLLPCAALGGACLLLLADTLARTLAAPAEMPVGMLTSLLGGPYFL
WLILRYREVSHGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecC AAL08453.1 FecC Virulence SRL Protein 7e-14 42
fecD AAL08452.1 FecD Virulence SRL Protein 8e-13 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAC_08265 YP_007629134.1 Hemin ABC transporter, permease protein BAC0163 Protein 5e-13 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAC_08265 YP_007629134.1 Hemin ABC transporter, permease protein VFG0922 Protein 5e-52 61
ETAC_08265 YP_007629134.1 Hemin ABC transporter, permease protein VFG1044 Protein 4e-14 42
ETAC_08265 YP_007629134.1 Hemin ABC transporter, permease protein VFG1043 Protein 5e-13 41