Gene Information

Name : ETAC_07645 (ETAC_07645)
Accession : YP_007629010.1
Strain : Edwardsiella tarda C07-087
Genome accession: NC_020796
Putative virulence/resistance : Virulence
Product : DNA-binding transcriptional activator CusR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1738695 - 1739378 bp
Length : 684 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
GTGAAGATACTGATCGTCGAGGATGAGGTGAAAACCGGGAAATACCTGTGTAAGGGGCTAACAGAGGCGGGATTTGTCGT
CGATCTCGCCGACAACGGTTTAACGGGATACCACCTGGCGATGACCGCCGGCTATGATCTGATCATCCTTGATATCCTGC
TGCCCGACGTCAACGGCTGGGAGATCGTCCGCATGCTGCGCAGCGCCAACCAGGGACTGCCGATCCTGCTGCTGAGCGCC
CTCGGCACCATCGAGCAGCGGGTAAAGGGGCTGGAGCTCGGCGCCGACGACTACCTGGTCAAGCCCTTCGCCTTCGCCGA
GCTCTTGGCGCGGGTGAGAACCCTGCTGCGACGCGGCAGCCCCCCTATCCCCGAGAGCCAGTTTCACGTCGCCGATCTCA
CCGTGGAGCTCCTTTCCAGAAAGGTGACCCGCGGCGGTAAGCGCATCACGCTAACGGGGAAAGAGTTCACCCTGCTGACG
TTTTTTATCCGTCACCAGGGCGAGGTGCTGCCCCGCTCCCTGATCGCCTCGCAGGTCTGGGACATGAACTTCGACAGCGA
CACCAACGCCATCGACGTGGCCGTGAAGCGGCTGCGGGCGAAGATCGACCTCGACTTCGAACCTAAGCTGATCCAGACGG
TGCGCGGCGTGGGCTACCTGCTCGAGGCGCCGGATGTCGACTAA

Protein sequence : 
MKILIVEDEVKTGKYLCKGLTEAGFVVDLADNGLTGYHLAMTAGYDLIILDILLPDVNGWEIVRMLRSANQGLPILLLSA
LGTIEQRVKGLELGADDYLVKPFAFAELLARVRTLLRRGSPPIPESQFHVADLTVELLSRKVTRGGKRITLTGKEFTLLT
FFIRHQGEVLPRSLIASQVWDMNFDSDTNAIDVAVKRLRAKIDLDFEPKLIQTVRGVGYLLEAPDVD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-48 54
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-47 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAC_07645 YP_007629010.1 DNA-binding transcriptional activator CusR BAC0111 Protein 4e-86 87
ETAC_07645 YP_007629010.1 DNA-binding transcriptional activator CusR BAC0347 Protein 1e-77 79
ETAC_07645 YP_007629010.1 DNA-binding transcriptional activator CusR BAC0083 Protein 8e-63 62
ETAC_07645 YP_007629010.1 DNA-binding transcriptional activator CusR BAC0638 Protein 6e-57 60
ETAC_07645 YP_007629010.1 DNA-binding transcriptional activator CusR BAC0308 Protein 2e-56 59
ETAC_07645 YP_007629010.1 DNA-binding transcriptional activator CusR BAC0197 Protein 1e-56 59
ETAC_07645 YP_007629010.1 DNA-binding transcriptional activator CusR BAC0125 Protein 9e-57 55
ETAC_07645 YP_007629010.1 DNA-binding transcriptional activator CusR NC_007793.3914065.p0 Protein 8e-28 41
ETAC_07645 YP_007629010.1 DNA-binding transcriptional activator CusR NC_002758.1121390.p0 Protein 8e-28 41
ETAC_07645 YP_007629010.1 DNA-binding transcriptional activator CusR NC_010079.5776364.p0 Protein 8e-28 41
ETAC_07645 YP_007629010.1 DNA-binding transcriptional activator CusR NC_002952.2859858.p0 Protein 8e-28 41
ETAC_07645 YP_007629010.1 DNA-binding transcriptional activator CusR NC_007622.3794948.p0 Protein 8e-28 41
ETAC_07645 YP_007629010.1 DNA-binding transcriptional activator CusR NC_003923.1003417.p0 Protein 8e-28 41
ETAC_07645 YP_007629010.1 DNA-binding transcriptional activator CusR NC_013450.8614146.p0 Protein 8e-28 41
ETAC_07645 YP_007629010.1 DNA-binding transcriptional activator CusR NC_002951.3238224.p0 Protein 8e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAC_07645 YP_007629010.1 DNA-binding transcriptional activator CusR VFG0596 Protein 1e-48 54
ETAC_07645 YP_007629010.1 DNA-binding transcriptional activator CusR VFG1390 Protein 9e-39 44
ETAC_07645 YP_007629010.1 DNA-binding transcriptional activator CusR VFG1389 Protein 6e-29 42