Gene Information

Name : ETAC_07235 (ETAC_07235)
Accession : YP_007628928.1
Strain : Edwardsiella tarda C07-087
Genome accession: NC_020796
Putative virulence/resistance : Virulence
Product : AraC family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1643769 - 1644167 bp
Length : 399 bp
Strand : -
Note : COG2207 AraC-type DNA-binding domain-containing proteins

DNA sequence : 
ATGACCCAGCAACAACGCAATGCCGCACTGGTCTGCGCCCTGAGCGAATGGATCGAGCGACACCTGGGGCGCGATATCTA
CCTGGATGAGCTGGCGCGCTATTCAGGCTATTCGCTATGGCATATGCAAAAGATCTTCCGAGAAACCACCGGTATGTCGC
TGGGGCGCTATATTCGCCTGCGCAAACTCACCGGCGCCGCCCGGCGCCTGCGTCACAGCGATGAGGGGATCATCGATATC
GCGCTGTGCTATGGCTTTGCCTCTCAGTCCCACTTTACCTATATGTTTCGTAAACACTTTGGTATGACGCCGACCCGCTA
CCGTCTGCAGGCCGAGCAGCCCACGACGCCAGCGCCGGCGCTACATCACCAGTATGCCGCCGCGGCGCAAAGCGCCTGA

Protein sequence : 
MTQQQRNAALVCALSEWIERHLGRDIYLDELARYSGYSLWHMQKIFRETTGMSLGRYIRLRKLTGAARRLRHSDEGIIDI
ALCYGFASQSHFTYMFRKHFGMTPTRYRLQAEQPTTPAPALHHQYAAAAQSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
soxS YP_219131.1 DNA-binding transcriptional regulator SoxS Not tested SPI-4 Protein 4e-16 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAC_07235 YP_007628928.1 AraC family transcriptional regulator CP001138.1.gene612.p Protein 1e-19 46
ETAC_07235 YP_007628928.1 AraC family transcriptional regulator CP000647.1.gene4499. Protein 2e-16 42
ETAC_07235 YP_007628928.1 AraC family transcriptional regulator CP001138.1.gene4488. Protein 1e-16 42
ETAC_07235 YP_007628928.1 AraC family transcriptional regulator CP001918.1.gene327.p Protein 1e-16 41
ETAC_07235 YP_007628928.1 AraC family transcriptional regulator CP000034.1.gene4505. Protein 5e-16 41
ETAC_07235 YP_007628928.1 AraC family transcriptional regulator BAC0371 Protein 3e-16 41
ETAC_07235 YP_007628928.1 AraC family transcriptional regulator NC_002695.1.914293.p Protein 3e-16 41
ETAC_07235 YP_007628928.1 AraC family transcriptional regulator CP000647.1.gene1624. Protein 7e-19 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAC_07235 YP_007628928.1 AraC family transcriptional regulator VFG0585 Protein 1e-16 42