|
Name : ETAC_07025 (ETAC_07025) Accession : YP_007628886.1 Strain : Edwardsiella tarda C07-087 Genome accession: NC_020796 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : - COG ID : - EC number : - Position : 1600122 - 1602050 bp Length : 1929 bp Strand : + Note : COG0550 Topoisomerase IA DNA sequence : ATGCGGCTGTTTATTGCGGAAAAGCCCAGCCTGGGGCGGGCCATTGCGGATGTGTTGCCTAAGCCGCACCGGCGTGCGGA TGGCTATATTCAGTGCGGTGACGGCGACGTGGTGACCTGGTGCGTGGGTCATCTGCTGGAGCAGGCCGAACCGGATGCCT ACGATGCCCGCTACGCGCGCTGGAATCTGGCCGATCTGCCGATTGTACCGCAGAAGTGGCAGCTGCGGCCCAAGGCATCG AGCGCCAAGCAGCTGAAGGTGATCGAGCGCCTGCTGCGCGATGCGCAGCAGGTGGTGCACGCCGGAGACCCGGATCGCGA AGGGCAGCTGCTGGTGGATGAGGTGCTCGACTTTCTGGCCCTGGCGCCGGAAAAGCGGCGCCAGGTACAGCGCTGCCTGA TCAACGATCTTAACCCCCAGGCGGTGGCGCGGGCGCTGGAGCGATTGCGCGATAACCATGAGTTTATGCCGCTGTGCGTC TCCGCGCTGGCGCGCGCGCGCGCCGACTGGCTGTATGGCATCAACATGACCCGCGCCTATACCCTGCTGGGGCGCAACGC CGGCTATAACGGCGTGCTCTCCGTGGGCCGGGTGCAGACGCCGGTGCTCGGGCTGGTGGTTCGCCGCGATGAGGAGATCG CGCACTTTGTCGCCAAGGACTACTACGAGGTGCGGGCGCATATCGTAACGCCGGCCGGCGAGCGCTTCTGGGCGCAGTGG CAGCCCAGCGAGGCCTGCGAACCCCATCAGGATGAAGAGGGGCGCCTGCTCAACCGTGCGCTGGCGGAGCATGTTATCGC CCGGATCCAGGATAAACCCGCCCGGGTGACCGGCTATAACGATAAGCGTGAGTCTGAGGTGGCGCCGCTGCCGTTCTCCC TGTCAGCGCTGCAGATCGAGGCCGCCAAACGCTTTGCTATGAGCGCTCAGCAGGTACTGGATACCTGTCAGCGTCTGTAT GAAACCCATAAGCTATTGACCTATCCCCGCTCCGACAGCCGTTACCTGCCGGAGGAGCACTTTGCCGGGCGCCATGCGGT GATGGCGGCGATTGCCGCCCATGCGCCGACGCTGGCCAATCTGGAGAGCGTCGACGTCCAGCGGCGTAACCGCTGCTGGG ATGACAGCAAGGTTGATGCCCACCATGCCATCATTCCCACGGCCCGGGCAGGCAGCGTCGCGCTAAATGAGGATGAGCGC AATATCTATCAGCTGGTGGCGCGTCAGTACCTGATGCAGTTCTGCCCCGATGCGCAGTACCGTAAGTGCGTCATCGATCT GGAGATTGAGGGGGGGATCTTTATCGCCAAGGCGCGTTTTCTGTCTCAGGCCGGCTGGCGTGCGCTGCTCGGTGCCAAGG AGCGCGACGACGAAGATGAGGGGATGCCGCTGCCGGTGGTGGCCCGCGATGACCTGCTGCACTGCGAGCGGGGCGAGCTG ATGGCGCGCCAGACGCAGCCGCCGCGTCACTTTACCGATGCCACGCTGCTGTCGGCCATGACCGGGATCGCCCGTTTTGT GCAGGATAAATCGCTAAAGAAAATCCTGCGAGCGACCGATGGTTTAGGGACCGAGGCTACGCGCGCCGGTATTATCGAAC TGCTGTTTCGCCGCGGGTTTCTGCATAAAAAGGGGCGCTATATCCACGCCAGCCCGGCGGGCAGCGCGCTGATCCACTGT TTGCCCGAGATGGCCGGTCGTCCGGATATGACGGCACACTGGGAGGCGACGCTGACGAAGATCAGTGAGCGGGGCTGCCG CTACCAGGACTTTATGCACCCGCTGGTGGAGACGCTGCAGCAGTTGATCCACCAGGCGCGTACCGCCGTGAACCCCCGAG CGTTCCGTGATCTGCCGCCCGCTGAGAGCGCCCGGCCACGGCGCGCCAAAGGGGCGTCAACTGCGTCAAATAAGAGGAAA AAAGCATGA Protein sequence : MRLFIAEKPSLGRAIADVLPKPHRRADGYIQCGDGDVVTWCVGHLLEQAEPDAYDARYARWNLADLPIVPQKWQLRPKAS SAKQLKVIERLLRDAQQVVHAGDPDREGQLLVDEVLDFLALAPEKRRQVQRCLINDLNPQAVARALERLRDNHEFMPLCV SALARARADWLYGINMTRAYTLLGRNAGYNGVLSVGRVQTPVLGLVVRRDEEIAHFVAKDYYEVRAHIVTPAGERFWAQW QPSEACEPHQDEEGRLLNRALAEHVIARIQDKPARVTGYNDKRESEVAPLPFSLSALQIEAAKRFAMSAQQVLDTCQRLY ETHKLLTYPRSDSRYLPEEHFAGRHAVMAAIAAHAPTLANLESVDVQRRNRCWDDSKVDAHHAIIPTARAGSVALNEDER NIYQLVARQYLMQFCPDAQYRKCVIDLEIEGGIFIAKARFLSQAGWRALLGAKERDDEDEGMPLPVVARDDLLHCERGEL MARQTQPPRHFTDATLLSAMTGIARFVQDKSLKKILRATDGLGTEATRAGIIELLFRRGFLHKKGRYIHASPAGSALIHC LPEMAGRPDMTAHWEATLTKISERGCRYQDFMHPLVETLQQLIHQARTAVNPRAFRDLPPAESARPRRAKGASTASNKRK KA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 9e-105 | 41 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 3e-103 | 41 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 3e-103 | 41 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 2e-103 | 41 |
