Gene Information

Name : G432_03855 (G432_03855)
Accession : YP_007615094.1
Strain : Sphingomonas sp. MM-1
Genome accession: NC_020561
Putative virulence/resistance : Resistance
Product : DEAD/DEAH box helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 802942 - 805005 bp
Length : 2064 bp
Strand : -
Note : COG1200 RecG-like helicase

DNA sequence :
ATGCGCCCCGACATTCTCAACCCGTTGTTCGCCGAAGTGGAAGCGTTGAAGGGCGTAGGCCCCGCGCTGATGAAACCGTT
GCGCAAGCTCGGCCTGGAACGCGCGGTGGACATATTGTTCCACCTTCCCGTCACCTGGATCGATCGCAAGGCGGTGCCGC
TGCTCGATCCGCAGGATGCCGGCAAGGTGATCGTGGTGGAGGTGACGCCGGCCGATTATCGCGCCACCGGCTCCGCCCGC
GCGCCCTTCCGGGTCCAGGCGCAGGATCGCGCCGGCCAGCGGATCAGCCTGGTCTATTTCGGGCGCAGTTCGGGCTGGGC
GCGCAAATTGTTCCCGCTGGGCGAGCCGCGCACCATTTCCGGCAAGCTGGAGCTTTACGGGCAGGAGATGCAGATGATCC
ACCCGGATCATGTGATCGCGCCCGGCGAGCCGGTGGACCTGCCGGCGCGCGAGCCGGTCTATCGCCTGTCCGAAGGGCTG
GCCAACCGGCGGATGGGGCAATTGGCGGAGCAGGCGCTGAGCCGCGCGCCCGACCTTGCCGAATGGATCGAGCCGGGGCT
GCTGGCCCGGCGGCAATGGCCCGGCTGGCGCGATGCGCTGGCCCGCGTCCACGCCGACCCCGCCGATACGCTGGCGCGCG
AACGGCTGGCCTATGACGAGATCTTCGCCAACCAGCTCGCCCTGATGCTGGTGCGCGCCTCCTCCCGCCGCCGCCGGGGG
CTGCCGCTGGTGGGCGACGGGCGGCTGCGGGCGGCGCTGAAGCTGCCTTATGCCCCGACCGGCGCGCAGCGGCGGACGAT
CGCGGAGATAGAGGGCGACCTGGCCCAGGCCACGCCGATGGTGCGGCTGCTGCAGGGCGATGTCGGCGCCGGCAAGACGC
TGGTGGCGCTGATGGCGCTGCTGGCGGCGGTGGAGGCGGGAACCCAGGGCGCGCTGCTCGCCCCGACCGAGATATTGGCG
CGGCAGCATTATGAGACGCTGAGCCGCCAGCTCGCCGGCCTTCCCGTCAATGTCGCGATCCTGACCGGGCGGGAAAAGGG
CCGCGCCCGCGAAAGCGTGCTGATGGGGCTGGCGGACGGATCGATCCATATCCTGATCGGCACGCATGCGATCTTCCAGC
AGGGCGTAAGCTACAAGCGCCTCGGCCTCGCGGTGATCGACGAGCAGCATCGCTTCGGCGTCGCCCAGCGGATGATGCTG
GCGGCCAAGGCGGAGGTGCCGCCGCATCTGCTGGTGATGACGGCCACGCCGATCCCGCGCACGCTGACGCTGAGCCATTA
TGGCGAGATGGATGTCAGCCGGCTCGACGAGATGCCGCCCGGCCGCCAGCCGATCGAGACGCGGGTGATGTCCGACGCGC
GGCTGGACGAGATCGTCGATGCGCTCGGCCGCCACATGGCGGGCGGGGGCCAGGCCTATTGGGTCTGCCCGCTGGTCGAG
GAGAGCGAAATATCCGACCAGGCGGCGGCCGAGGCCCGCGCGGCGGACCTCAGGCAGCGCTTCGGCGATCGGGTGGGGCT
GGTGCACGGCCGGATGAAGGGGCCGGAGAAGGATGCGGTGATGGCCGCCTTCCAGCGCGGCGACATCGGCGTGCTGGTGG
CCACCACCGTGATCGAGGTGGGCGTGGACGTGCCGAACGCCACGCTGATCGTGATCGAGGGCGCGGACAGGTTCGGCCTG
GCCCAGCTCCACCAGCTTCGCGGCCGGGTGGGGCGCGGGGAGGGGCGGTCCATCTGCCTGCTGTTGCGCGGCCGCACGCC
GGGCGAGACGGCGCGCGCGCGGCTGGCCCTGATGCGCGAGACCAATGACGGCTTCCGCATCGCCGAGGAGGACCTGAAGC
TGCGCGGTGCCGGCGAGATATTGGGCACGCGGCAATCGGGCGAGGCGGAGATGCGGCTGGCCGATCCCGAGCAGGTTTCC
CAGCTTATCGATACCGCCACGGCGGACGCGCGCCTGCTGGTGGATCGCGACGGCGGGCTGGAAGGCGATCGCGGCCGCGC
GGCGCGGGTGGCGCTTTATCTTTTCGAGCGGGATGCGGCGGTGGGGCTGCTGCGATCGGGCTGA

Protein sequence :
MRPDILNPLFAEVEALKGVGPALMKPLRKLGLERAVDILFHLPVTWIDRKAVPLLDPQDAGKVIVVEVTPADYRATGSAR
APFRVQAQDRAGQRISLVYFGRSSGWARKLFPLGEPRTISGKLELYGQEMQMIHPDHVIAPGEPVDLPAREPVYRLSEGL
ANRRMGQLAEQALSRAPDLAEWIEPGLLARRQWPGWRDALARVHADPADTLARERLAYDEIFANQLALMLVRASSRRRRG
LPLVGDGRLRAALKLPYAPTGAQRRTIAEIEGDLAQATPMVRLLQGDVGAGKTLVALMALLAAVEAGTQGALLAPTEILA
RQHYETLSRQLAGLPVNVAILTGREKGRARESVLMGLADGSIHILIGTHAIFQQGVSYKRLGLAVIDEQHRFGVAQRMML
AAKAEVPPHLLVMTATPIPRTLTLSHYGEMDVSRLDEMPPGRQPIETRVMSDARLDEIVDALGRHMAGGGQAYWVCPLVE
ESEISDQAAAEARAADLRQRFGDRVGLVHGRMKGPEKDAVMAAFQRGDIGVLVATTVIEVGVDVPNATLIVIEGADRFGL
AQLHQLRGRVGRGEGRSICLLLRGRTPGETARARLALMRETNDGFRIAEEDLKLRGAGEILGTRQSGEAEMRLADPEQVS
QLIDTATADARLLVDRDGGLEGDRGRAARVALYLFERDAAVGLLRSG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 8e-138 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
G432_03855 YP_007615094.1 DEAD/DEAH box helicase BAC0356 Protein 6e-105 45