Gene Information

Name : smpB (G432_18030)
Accession : YP_007617920.1
Strain : Sphingomonas sp. MM-1
Genome accession: NC_020561
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3832603 - 3833085 bp
Length : 483 bp
Strand : +
Note : COG0691 tmRNA-binding protein

DNA sequence :
ATGGCCCGCCCCAAGCCCGCAACCTTTGAAAAAGTGAAGACGGTCGCCGAAAACCGGCGGGCGCGGTATGAATATTTCCT
GGAGGAATTCTTCGAGGCGGGCATCGCGCTGACCGGCACCGAGGTGAAGTCGCTGCGGTTCGGCGAGGGATCGATCGCTG
AAAGCTATGCCGAGGTGAGGGACGGGCAGGCCTGGCTCATCAATTCCAACATTCCGGAATTCAGCCACGGCAACCGTTTC
AATCACGAGCCGAAACGGCCGCGCAAGCTGCTGCTGCACGAACGAGAGATCGAAAAGATGCGCAACGCCGTCTCCCGCGA
GGGGATGACGCTGATTCCGCTGTCCATCTATTTCAATCCGCGCGGCCGGGCGAAGGTGGAACTCGCGCTCGCCAAGGGCA
AGAAATTGCACGACAAGCGGGAGACGGAAAAGTCGCGGGACTGGAAACGCGAACAGCAGCGCCTGCTGCGCGACCGGGGT
TAG

Protein sequence :
MARPKPATFEKVKTVAENRRARYEYFLEEFFEAGIALTGTEVKSLRFGEGSIAESYAEVRDGQAWLINSNIPEFSHGNRF
NHEPKRPRKLLLHEREIEKMRNAVSREGMTLIPLSIYFNPRGRAKVELALAKGKKLHDKRETEKSRDWKREQQRLLRDRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 2e-27 46
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 4e-26 46
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 1e-27 44