Gene Information

Name : G432_17260 (G432_17260)
Accession : YP_007617766.1
Strain : Sphingomonas sp. MM-1
Genome accession: NC_020561
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3669254 - 3669940 bp
Length : 687 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence :
GTGACACACAAGATCCTCGTCATTGAAGACGATCAGGCGGCCGCATCCTATATCGTGAAGGGGCTGGTGGAGGCCGGCTT
CACCGTCGACCAGGCGGATAATGGCCGCGACGGCCTGTTCCACGCCACCGACGGCCGTTACGACGCCATCATCCTCGATC
GCATGCTGCCGGGCATGGACGGCATGGCGGTGCTGGGCGCGATGCGCGCCGCCGGCATCGAGACGCCGGTGCTGATCCTT
TCCGCGCTGGCATCGGTGGACGACAGGGTCGCGGGGCTGACGGCGGGATCGGACGACTATCTCACCAAACCCTTCGCCTT
CGCCGAGCTGCACGCCCGCCTGAACCTGCTGCTGCGCCGGCGCGGAAGCGGAACCGCGCCCGAAACGCGGCTCGCCTGCG
ACGATCTGGAAATGGACCTCCTGTCCCGCAAGGTGCGGCGCGGCGGAACCGGCATCGACCTGCAGCCGCGCGAGTTCCGC
CTGCTGGAATATATGCTGCGCCATCGCGGCCAGGTGGTGACGCGCACCATGCTGCTGGAAGGCGTGTGGGATTATCATTT
CGATCCCGGCACCAACGTGATCGACGTGCATATCAGCCGGCTGCGCAAGAAGATCGACGAGGGATTCGATCGTCCGCTGC
TGCATACGGTGCGGGGCGCCGGTTATCGCCTGGGCGCGGACGGCTGA

Protein sequence :
MTHKILVIEDDQAAASYIVKGLVEAGFTVDQADNGRDGLFHATDGRYDAIILDRMLPGMDGMAVLGAMRAAGIETPVLIL
SALASVDDRVAGLTAGSDDYLTKPFAFAELHARLNLLLRRRGSGTAPETRLACDDLEMDLLSRKVRRGGTGIDLQPREFR
LLEYMLRHRGQVVTRTMLLEGVWDYHFDPGTNVIDVHISRLRKKIDEGFDRPLLHTVRGAGYRLGADG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-42 48
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 6e-41 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
G432_17260 YP_007617766.1 two component transcriptional regulator BAC0125 Protein 1e-48 52
G432_17260 YP_007617766.1 two component transcriptional regulator BAC0638 Protein 5e-41 51
G432_17260 YP_007617766.1 two component transcriptional regulator BAC0083 Protein 4e-46 50
G432_17260 YP_007617766.1 two component transcriptional regulator BAC0111 Protein 3e-49 50
G432_17260 YP_007617766.1 two component transcriptional regulator BAC0347 Protein 2e-44 49
G432_17260 YP_007617766.1 two component transcriptional regulator BAC0308 Protein 1e-44 48
G432_17260 YP_007617766.1 two component transcriptional regulator BAC0197 Protein 1e-40 47
G432_17260 YP_007617766.1 two component transcriptional regulator HE999704.1.gene1528. Protein 2e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
G432_17260 YP_007617766.1 two component transcriptional regulator VFG1389 Protein 2e-37 50
G432_17260 YP_007617766.1 two component transcriptional regulator VFG0596 Protein 2e-42 48
G432_17260 YP_007617766.1 two component transcriptional regulator VFG1386 Protein 6e-38 44
G432_17260 YP_007617766.1 two component transcriptional regulator VFG1390 Protein 3e-34 41