Gene Information

Name : G432_12985 (G432_12985)
Accession : YP_007616912.1
Strain : Sphingomonas sp. MM-1
Genome accession: NC_020561
Putative virulence/resistance : Unknown
Product : symbiosis island integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2734974 - 2736167 bp
Length : 1194 bp
Strand : -
Note : COG0582 Integrase

DNA sequence :
ATGGCGCTGAAAGACACGGAAATCAGGGCTTTTCGGCCACTCGATAAACCCTATCGAAAGGCCGATAGCGGCGGCCTCTA
CCTTGAAGTTTTCCCCAACGGCTCGAAGCTCTGGCGCTGGAAGTTTCGCATTGCGGGCAAGGAGAAGCGACTTGCACTCG
GGGCTTATCCTGCCGTCTCGCTGAAAGAAGCCCGGGCCACGCGCGATGACGAAAAGGCAAAGCTGCTCAAGGGCGTTGAT
CCGGCCTTGGATCGCAAGCGAGGCAAGGTCGCTGCCAAGATCAGCGCCGCCAACACCTTCGCTGCCGTGGCCCACGAATA
TATTGATACGAAGATGGTCGGCGAATCACGGGCTGATGCGACGATCAGCAAGGCTCGATGGTTCCTTGAGCAGCTGGAGC
CCGCCATCGGCAAAATGCCGATCGCGGAGGTCGATCAGCAAATGCTGCTGGCGGCGCTGATGCGGGTGCAGATGAGGGGG
CGATATGAGACGGCGAAGAAATGCCGGTCGTTCGCGAGCCGAGTCTTCCGTTATGGCGTCGTGACGGGGCGGTGCGCCTC
CGACCCTGCCCATTTGCTACAAGGCGCTCTGACCACGCCTCAGGCCAAGCATTACGCCGCGATTCTGGAGCCTGCCAAAC
TGGGCGAGCTTCTGCGCGCGATCGATACATTCACCGGCAGCCCCGTTACCAAGGCAGCGCTTCAGATCGCGCCGCATGTG
TTCGTCAGACCGGGCGAGCTGCGCCATGCCGAATGGGCGGAGTTCAATCTTGAGGAGGGCATCTGGAACTTGCCCGCCGC
CAAAATGAAGGCGCGGCGGCCCCATGCCGTGCCATTGTCGCGACAGGTGAAGCAGATGCTCGTGGAACTGCGGACGCTTA
CCGGCTCGGGAAAGTATGTGTTCCCCTCCGCCAATGGCCCCAGCCGTCCAATGAGCGAAAACACGCTGAACGCCTCGTTC
CGGCGTATGGGCTTCGACAAGGACGAGGTGACGGCCCACGGGTTGCGCGCCACGGCCTCGACCCTGCTCAATCAAAGCGG
GCTGTGGAATCCCGATGCGATCGAGCGCGCCCTTGCCCATGGCGAAAGCAATGCCACGCGCGGGGCCTATCATCGCGGGC
TTTATTGGGATGAGCGCGTCCGCATGGCGCAGTGGTGGAGCGATTATCTGGATGAGCGCCATGTGAGCAAATGA

Protein sequence :
MALKDTEIRAFRPLDKPYRKADSGGLYLEVFPNGSKLWRWKFRIAGKEKRLALGAYPAVSLKEARATRDDEKAKLLKGVD
PALDRKRGKVAAKISAANTFAAVAHEYIDTKMVGESRADATISKARWFLEQLEPAIGKMPIAEVDQQMLLAALMRVQMRG
RYETAKKCRSFASRVFRYGVVTGRCASDPAHLLQGALTTPQAKHYAAILEPAKLGELLRAIDTFTGSPVTKAALQIAPHV
FVRPGELRHAEWAEFNLEEGIWNLPAAKMKARRPHAVPLSRQVKQMLVELRTLTGSGKYVFPSANGPSRPMSENTLNASF
RRMGFDKDEVTAHGLRATASTLLNQSGLWNPDAIERALAHGESNATRGAYHRGLYWDERVRMAQWWSDYLDERHVSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SESS1296_03598 AFO66301.1 bacteriophage integrase Not tested SESS LEE Protein 6e-70 42
SESS1635_03816 AFO66367.1 bacteriophage integrase Not tested SESS LEE Protein 6e-70 42
int CAC39282.1 integrase Not tested LPA Protein 3e-64 41
aec33 AAW51716.1 Int Not tested AGI-3 Protein 2e-64 41
unnamed AFX83955.1 integrase Not tested SE-PAI Protein 1e-68 41
int AAD44730.1 Int Not tested SHI-2 Protein 7e-64 41