Gene Information

Name : G432_11060 (G432_11060)
Accession : YP_007616531.1
Strain : Sphingomonas sp. MM-1
Genome accession: NC_020561
Putative virulence/resistance : Virulence
Product : putative capsule polysaccharide export ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2330365 - 2331012 bp
Length : 648 bp
Strand : +
Note : COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component

DNA sequence :
ATGATCGTCTGCGAAAATCTGCACAAGGCATATAAGGTCGGAGCGGGCTCAAAGACCGTTCTCAGCAACTTCAACTTCAC
CGTCGAGCGAGGCGAGCATATCGGCTTGCTCGGCCGCAATGGCGCGGGCAAGACCACCCTTATCAAGATGATTGGCGGCG
TGGAAATGCCCACGTCGGGCAAGGTCCGCCGCAAGATGACCGTTTCCTGGCCGCTGGGTTTTGCGGGCGGTTTCCAAGGT
AGTCTGACGGGATATGATAATGCGCGGTTCATCGCGCGCATATATGGCTCCCGATACGAAGACATCCGCGACTTTGTCGA
GGACTTCACGGAATTGGGCCGGCAGCTGAAGATGCCGGTGAAGACCTATTCATCGGGCATGCGGGCGCGGCTGGCCTTTG
CTCTTTCTCTGGCGATCGAGTTTGATTGTTATCTGATCGATGAGATCATCATGGTCGGGGACCAGAATTTTCAACGCAAA
TCCCATCACGAGCTATTTGAAAAGCGTGCCGATCGTGCCCTGATACTGGCGTCGCACAGCCCCGAAATCGTTCGGAAGTT
CTGCGACCGGGCGCTGATCATTCACAAGGGGGTTGGGGCTATCTACGAAGATGTCAACAAGGCCCTGGAAGTTTACTCCA
AGCTCTAG

Protein sequence :
MIVCENLHKAYKVGAGSKTVLSNFNFTVERGEHIGLLGRNGAGKTTLIKMIGGVEMPTSGKVRRKMTVSWPLGFAGGFQG
SLTGYDNARFIARIYGSRYEDIRDFVEDFTELGRQLKMPVKTYSSGMRARLAFALSLAIEFDCYLIDEIIMVGDQNFQRK
SHHELFEKRADRALILASHSPEIVRKFCDRALIIHKGVGAIYEDVNKALEVYSKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 6e-58 57
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 3e-46 49
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 2e-42 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
G432_11060 YP_007616531.1 putative capsule polysaccharide export ATP-binding protein VFG0258 Protein 2e-58 57
G432_11060 YP_007616531.1 putative capsule polysaccharide export ATP-binding protein VFG0696 Protein 8e-57 56
G432_11060 YP_007616531.1 putative capsule polysaccharide export ATP-binding protein VFG2563 Protein 1e-52 53
G432_11060 YP_007616531.1 putative capsule polysaccharide export ATP-binding protein VFG1449 Protein 1e-46 49