Gene Information

Name : G432_08355 (G432_08355)
Accession : YP_007615992.1
Strain : Sphingomonas sp. MM-1
Genome accession: NC_020561
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1718764 - 1721340 bp
Length : 2577 bp
Strand : +
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGAACCTCGAAAAATTCACCGATCGCGCCAAAGGCTTCCTGCAATCGGCGCAGACCGTGGCGATCCGCCTCAACCACCA
GCAGATCACCCCCGAACATATATTGAAGGCCCTGCTGGAGGATGAGCAAGGCATGGCCGCGGGGCTGATCCGCGCCGCCG
GCGGCCAGCCCGAAACCGCGATGCGCGAAACCGATGCCGCGCTCGCCCGGATTCCCGCCGTATCGGGCAGCGGCGCCCAG
GCCACGCCGGGCCTGACCAACGATGCCGTTCGCGTGCTCGACCAGGCGGAGCAGATCGCGACCAAGGCGGGCGACAGCTT
CGTCACCGTCGAGCGCCTGCTGCTCGCCCTCGCCCTTTCCAGCACCGCTGCCGGCAAGGCGCTGGCGGCGGCCGGCGTGC
ATGCCGACAGCCTGAACCAGGCGATCAACCAGCTCCGCAAGGGCCGCACCGCCGACACCGCCGGCGCCGAGGACCGTTAC
GACGCGCTCAAGAAGTTCGCGCGCGACCTCACCGAGGCGGCGCGCGACGGCAAGCTCGATCCGGTCATCGGCCGCGATGA
GGAGATTCGCCGCACCATCCAGATCCTCGCCCGCCGCACCAAGAACAATCCGGTGCTGATCGGCGAGCCCGGCGTGGGCA
AGACCGCCATCGCCGAGGGGCTGGCGCTGCGCATCGCCAATGGCGACGTGCCCGATACGCTGAAGGATCGCACGCTGATG
GCGCTCGACATGGGATCGCTGATCGCGGGCGCCAAATATCGCGGCGAGTTCGAGGAGCGCCTCAAGGGCGTGCTCGACGA
GGTGAAGCAGGCCGAGGGCGACATCATCCTGTTCATCGACGAGATGCACACGCTGATCGGCGCGGGCAAGTCCGAAGGCG
CGATGGATGCCTCCAACCTGCTGAAGCCGGCCCTGGCGCGGGGCGAGCTGCACTGCATCGGCGCCACCACGCTCGACGAA
TATCGCAAATATGTGGAGAAGGACCCCGCGCTCCAGCGGCGGTTCCAGCCCGTCTTCGTCGGCGAGCCGACGGTGGAGGA
CACCATCTCCATCCTGCGCGGCCTCAAGGAGAAATATGAGCTGCACCACGGCGTGCGGATCACCGACGGCGCGCTGGTAT
CGGCCGCCACCCTCTCCAACCGCTACATCACAGATCGCTTCTTGCCCGACAAGGCGATCGACCTGATGGACGAGGCGGCC
AGCCGACTGCGCATGGAGGTGGAGTCGAAGCCCGAGGAGATCGAGAATCTCGACCGCCGGATCATCCAGCTCAAGATCGA
GCGCGAGGCGCTGAAGAAGGAGACCGACCAGGCCTCCAAGGACCGCCTGGGGGCGCTCGAATATGATCTCGCCCAGCTCG
AGCAGCAATCCGCGGAGCTGACGACGCGCTGGCAGGCCGAGAAGGAGAAGATCCACGCCGAGGCCAAGATCAAGGAACAG
CTCGATGCCGCGCGCATCGAGCTGGACCAGGCGCAGCGCAGCGGCAACCTCGCACGAGCCGGCGAGCTCAGCTACGGCGT
GATCCCCCAGCTCGAAAAGCAGCTCGGCGAGGCGCAGGCCGCTTCCGAGAGCGCGATGCTGCGCGAGGAGGTGACGAGCG
AGGACATCGCCTCGGTCGTCAGCCGCTGGACGGGCATTCCGGTCGACAAGATGCTGGAGGGCGAGCGCGAGAAGCTGCTC
AATATGGAGGAGGAGCTGGGCAGGCGCGTGATCGGGCAGCAGGACGCGGTTTCCGCCGTCGCCCGCGCCGTGCGCCGCAG
CCGCGCGGGGCTGCAGGACCCGAACCGGCCGCTCGGCTCCTTCCTGTTCCTCGGCCCGACGGGCGTGGGCAAGACGGAGC
TGACCAAGGCGCTGGCCGGTTTCCTGTTCGACGACGATTCGGCGATGGTCCGCATCGACATGAGCGAGTTCATGGAGAAG
CATTCGGTCGCCCGCCTGATCGGCGCCCCTCCCGGCTATGTCGGCTATGAGGAAGGCGGCGTGCTGACAGAGGCCGTGCG
CCGGCGCCCCTATCAGGTGGTGCTGTTCGACGAGGTGGAGAAGGCGCACAACGACGTGTTCAACGTGCTGCTCCAGGTGC
TCGACGACGGGCGGCTGACCGACGGCCAGGGCCGCACGGTCGACTTCTCGAACACGCTCATCATCCTCACCTCCAACCTG
GGCAGCCAGTTCCTGTCCAGCCTGCCCGATGGCGCGGACGTGGAATCGGTGGAACCGCAGGTGATGGACGTGGTGCGCGC
GCACTTCCGCCCGGAATTCCTGAACCGGCTGGACGAGATCATCCTGTTCCACCGGCTGGGCCAGGAGCATATGGGCCCGA
TCGTCGACATCCAGGTCGCGCGCGTCCAGAAGCTGCTGAAGGACCGCAAGATCGCGCTCTCGCTCACCGATGCGGCGCGC
GCCTGGCTGGGCCGGGTCGGCTACGATCCGGTCTATGGCGCCCGGCCGCTGAAGCGGGCGGTGCAGAAATATCTGCAGGA
CCCGCTGGCCGACGCGATCCTGAAAGGCGAAATCCGCGACGGATCGCTCGTCACCATCGACGAGGGCGATGGCGCCCTGG
TGCTGAAGACGGGCTGA

Protein sequence :
MNLEKFTDRAKGFLQSAQTVAIRLNHQQITPEHILKALLEDEQGMAAGLIRAAGGQPETAMRETDAALARIPAVSGSGAQ
ATPGLTNDAVRVLDQAEQIATKAGDSFVTVERLLLALALSSTAAGKALAAAGVHADSLNQAINQLRKGRTADTAGAEDRY
DALKKFARDLTEAARDGKLDPVIGRDEEIRRTIQILARRTKNNPVLIGEPGVGKTAIAEGLALRIANGDVPDTLKDRTLM
ALDMGSLIAGAKYRGEFEERLKGVLDEVKQAEGDIILFIDEMHTLIGAGKSEGAMDASNLLKPALARGELHCIGATTLDE
YRKYVEKDPALQRRFQPVFVGEPTVEDTISILRGLKEKYELHHGVRITDGALVSAATLSNRYITDRFLPDKAIDLMDEAA
SRLRMEVESKPEEIENLDRRIIQLKIEREALKKETDQASKDRLGALEYDLAQLEQQSAELTTRWQAEKEKIHAEAKIKEQ
LDAARIELDQAQRSGNLARAGELSYGVIPQLEKQLGEAQAASESAMLREEVTSEDIASVVSRWTGIPVDKMLEGEREKLL
NMEEELGRRVIGQQDAVSAVARAVRRSRAGLQDPNRPLGSFLFLGPTGVGKTELTKALAGFLFDDDSAMVRIDMSEFMEK
HSVARLIGAPPGYVGYEEGGVLTEAVRRRPYQVVLFDEVEKAHNDVFNVLLQVLDDGRLTDGQGRTVDFSNTLIILTSNL
GSQFLSSLPDGADVESVEPQVMDVVRAHFRPEFLNRLDEIILFHRLGQEHMGPIVDIQVARVQKLLKDRKIALSLTDAAR
AWLGRVGYDPVYGARPLKRAVQKYLQDPLADAILKGEIRDGSLVTIDEGDGALVLKTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 8e-106 43
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 3e-106 43
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 2e-106 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
G432_08355 YP_007615992.1 ATPase VFG2084 Protein 2e-112 45
G432_08355 YP_007615992.1 ATPase VFG2076 Protein 1e-119 45