Gene Information

Name : G432_05920 (G432_05920)
Accession : YP_007615507.1
Strain : Sphingomonas sp. MM-1
Genome accession: NC_020561
Putative virulence/resistance : Virulence
Product : FliI/YscN family ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1214636 - 1215967 bp
Length : 1332 bp
Strand : -
Note : COG1157 Flagellar biosynthesis/type III secretory pathway ATPase

DNA sequence :
ATGACGGGGATGCTCGCGGGCCGCGCGGCGGCGCTGCTCGATACCATCGATATCGCGCAAGGCGGGCCGCGCCGGATCGG
CCGGCTGGCCGCCTATGACGGGCTGATGCTGGAGGCGACCGGATTCCACCAGCCGATCGGATCGGGCGCGCGCGTGATCG
ATGCGGAAGGCAATGCCTGCCGGGCCGAGGTGGTGGGCTTTCGCGGCAACCGCACGCTGATGATGGCATTGGACAGCGAT
GCCCCGCACATCACCGGCGCGCGCGTGGAGCCGGACAGCCGGGGCGGATCGGTGGCGGTGGGCGCGGAGCTGCTGGGCCG
CGTGGTCGATGCGCTGGGCGAGCCGCTGGACGGGCTGGGGCCGATCGCAGCCGCCCATCGCTGGCCGCTGGCCGGGCGTC
CGGGCAATCCGCTCAACCGCGCGCGCGTGACCGAGCCGTTCGACATGGGCGTGCGCGCGATCAACGCGCTGCTTACCGCC
GGCGTCGGCCAGCGCATCGCCATCGCCGCCGGATCGGGCGTCGGCAAATCGGTGCTGATGGGCCAGATGATCGCCGGCGC
CGAATGCGACGTGATCGTGGTGGGGCTGGTGGGCGAGCGCAGCCGCGAGGTTTCCGATTTCCTCGCCACCAAGCTATCCG
GCGCCGTGCGGCAGAAGAGCGTGGTGGTGGCGGTGCCGGCGGATCATCCGCCGCTCCTGCGCCTGCGCGCGGCGATGCGG
GCGACCGCGATCGCGGAATTCTTCCGCGAGGCGGGCCTGCGCGTGCTGCTGCTGATCGACAGCCTGACGCGCGTGGCCCA
TGCCCAGCGCGAGATCGGCCTTTCGCTGGGCGAGCCGCCGACGATGAAGGGTTATCCGCCCTCCGCGCTCGGCCTCATCC
CCCGCCTCATCGAACGTGCCGGCGCCGACGCCCGCACCGGCGGATCGATCACGGCCATCTATACCGTGCTGGCCGATGGC
GACGATACCGACGATCCGGTCGTCGATACCGCGCGCGCCATCGTCGACGGGCACATCATCCTTTCCCGCAGCCTGGCCGA
GCAGGGCGTGTTCCCCGCCATCGACGTGGGCAAATCGCTGAGCCGGGTGATGCCCGACGTGGTCGAGCCGGATCATCTCC
GCGCCGCCGCCAATCTCCGCCGGCTGTGGGCGGCCTATGAGGAGAATCGCGACCTGATCCTGATGGGCGCCTATCGCGAG
GGCAGCGATCCGCGCATCGACGAGGCGGTGATGCGGCAGGCGGATATCCGCGCCTTCATCTCCCAAGGCCAGAAGGAACG
GGTGGACGGCGGCGAGTCCGTCGCCCGGCTGATCGCGGAGTTCGGGGCATGA

Protein sequence :
MTGMLAGRAAALLDTIDIAQGGPRRIGRLAAYDGLMLEATGFHQPIGSGARVIDAEGNACRAEVVGFRGNRTLMMALDSD
APHITGARVEPDSRGGSVAVGAELLGRVVDALGEPLDGLGPIAAAHRWPLAGRPGNPLNRARVTEPFDMGVRAINALLTA
GVGQRIAIAAGSGVGKSVLMGQMIAGAECDVIVVGLVGERSREVSDFLATKLSGAVRQKSVVVAVPADHPPLLRLRAAMR
ATAIAEFFREAGLRVLLLIDSLTRVAHAQREIGLSLGEPPTMKGYPPSALGLIPRLIERAGADARTGGSITAIYTVLADG
DDTDDPVVDTARAIVDGHIILSRSLAEQGVFPAIDVGKSLSRVMPDVVEPDHLRAAANLRRLWAAYEENRDLILMGAYRE
GSDPRIDEAVMRQADIRAFISQGQKERVDGGESVARLIAEFGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-65 47
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 4e-64 47
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 2e-65 47
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-64 47
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-65 46
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 3e-65 46
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 3e-65 46
lscN AAO18044.1 LscN Virulence TTSS locus Protein 2e-62 46
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 1e-60 46
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 1e-55 45
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-61 45
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-61 45
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 9e-54 45
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 4e-52 45
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 3e-52 45
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-52 45
escN YP_003223475.1 translocator EscN Virulence LEE Protein 1e-58 45
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 1e-58 45
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 2e-52 45
escN AAK26715.1 EscN Virulence LEE Protein 1e-58 45
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-52 45
escN AAL57542.1 EscN Virulence LEE Protein 1e-58 45
escN CAI43874.1 EscN protein Virulence LEE Protein 9e-59 45
escN CAC81862.1 EscN protein Virulence LEE II Protein 8e-59 45
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 5e-54 44
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 4e-56 44
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 5e-56 44
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 6e-58 44
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 6e-58 44
escN AAC38383.1 EscN Virulence LEE Protein 9e-58 44
ECs4568 NP_312595.1 EscN Virulence LEE Protein 1e-57 44
escN YP_003236088.1 translocator EscN Virulence LEE Protein 6e-58 44
unnamed AAL06369.1 EscN Virulence LEE Protein 2e-58 44
escN AAC31513.1 L0034 Virulence LEE Protein 1e-57 44
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 1e-57 44
escN NP_290268.1 hypothetical protein Virulence LEE Protein 1e-57 44
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 3e-50 43
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 3e-50 43
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 5e-58 43
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 2e-56 43
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 7e-57 42
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 7e-57 42
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 2e-57 42
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 2e-46 42
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 2e-46 42
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 2e-46 42
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 2e-46 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
G432_05920 YP_007615507.1 FliI/YscN family ATPase VFG1254 Protein 1e-73 51
G432_05920 YP_007615507.1 FliI/YscN family ATPase VFG2331 Protein 3e-70 49
G432_05920 YP_007615507.1 FliI/YscN family ATPase VFG2499 Protein 5e-68 48
G432_05920 YP_007615507.1 FliI/YscN family ATPase VFG0192 Protein 3e-61 47
G432_05920 YP_007615507.1 FliI/YscN family ATPase VFG0390 Protein 3e-62 47
G432_05920 YP_007615507.1 FliI/YscN family ATPase VFG0048 Protein 5e-63 46
G432_05920 YP_007615507.1 FliI/YscN family ATPase VFG0515 Protein 2e-52 45
G432_05920 YP_007615507.1 FliI/YscN family ATPase VFG0730 Protein 5e-58 44
G432_05920 YP_007615507.1 FliI/YscN family ATPase VFG0812 Protein 6e-58 44
G432_05920 YP_007615507.1 FliI/YscN family ATPase VFG2144 Protein 6e-50 42
G432_05920 YP_007615507.1 FliI/YscN family ATPase VFG0555 Protein 9e-47 42