Gene Information

Name : fliP (G432_05885)
Accession : YP_007615500.1
Strain : Sphingomonas sp. MM-1
Genome accession: NC_020561
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1209552 - 1210364 bp
Length : 813 bp
Strand : -
Note : COG1338 Flagellar biosynthesis pathway, component FliP

DNA sequence : 
ATGCTGAAACGGGTTCTGCATGACGGCGGGAGCATAAGGCGCGGGCTCGTCGTCGCAGTGATCGCCTTGCTGGCGATGCT
GCTGTGGACGCATCCGGCCTTCGCGCAGGCGGCGCCCGTGCCGCCGCCGGCCGGCCCCGGCGCGCTCGATCGCGCGCTCA
CCACCATCTCCGGCGACGGGCGCCCGCTTTCGCTGTCGCTCCAGATCCTTGTCCTGATGAGCCTGCTGACGGTGCTGCCG
TCGCTGGTGCTGATGATGACGAGCTTCACCCGCATCATCATCGTGCTGTCGATCCTGCGCCAGGCGCTGGGCCTGCAGCA
GACGCCGCCCAACCAGGTGCTGGTGGGCCTCGCGCTCTTCCTGTCGCTGTTCGTGATGCGGCCCGTGATCGCGGAGATCA
ACACCAGCGCCTACACGCCCTATGGCGCGGGCCAGATCGGCATCGAGGATGCGATCAAGCGATCGGGCACGGCGCTCCAC
GGTTTCATGGTGAAGCAGACGCGGGAGACCGACCTCAAGCTGTTCGCCGATCTCGCCAAGGTGCCGCCCTTCGCCAGCAC
GGCGGAAATCCCCTTCTCGATCCTGCTGCCCTCCTTCGTCACCAGCGAGCTGAAGACGGCCTTCCAGATCGGCTTCCTGA
TCTTCCTGCCCTTCCTCATCATCGATCTGGTGGTGGCCTCCACCCTGATGGCGCTGGGCATGATGATGCTGTCGCCGTCG
ATCGTCTCGATGCCGTTCAAGCTCCTGCTGTTCGTGATGGTCGATGGCTGGGCGCTGACCATGGGATCGCTGGCGGGATC
GTTCGCGACATGA

Protein sequence : 
MLKRVLHDGGSIRRGLVVAVIALLAMLLWTHPAFAQAAPVPPPAGPGALDRALTTISGDGRPLSLSLQILVLMSLLTVLP
SLVLMMTSFTRIIIVLSILRQALGLQQTPPNQVLVGLALFLSLFVMRPVIAEINTSAYTPYGAGQIGIEDAIKRSGTALH
GFMVKQTRETDLKLFADLAKVPPFASTAEIPFSILLPSFVTSELKTAFQIGFLIFLPFLIIDLVVASTLMALGMMMLSPS
IVSMPFKLLLFVMVDGWALTMGSLAGSFAT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 2e-17 43
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 2e-17 43
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 6e-18 42
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 5e-18 42
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 6e-18 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_007615500.1 flagellar biosynthesis protein FliP VFG0044 Protein 4e-19 42
fliP YP_007615500.1 flagellar biosynthesis protein FliP VFG0188 Protein 2e-20 41
fliP YP_007615500.1 flagellar biosynthesis protein FliP VFG0394 Protein 1e-19 41