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Name : oppD (SM2011_b21199) Accession : YP_007613617.1 Strain : Genome accession: NC_020560 Putative virulence/resistance : Unknown Product : ABC transporter of tetrapeptides and some tripeptides,ATP-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 948719 - 950320 bp Length : 1602 bp Strand : + Note : corresponds to SMb21199 DNA sequence : ATGACAGAGATGAAGGACTCCATTCTCGCTGTACGTGGCCTGAAGGTCGACTTTTACACCCCCGACGGCACCGTCGAAGC GGTCAAGGGCATCGATCTCGACGTCCGTTCCGGCGAGACGCTCGCGGTCGTCGGCGAATCCGGCTCGGGCAAGAGCCAGA CCATGATGGGAATCATGGGCCTGCTCGCCAAGAACGGCACGGTGACCGGTTCGGCGCGCTATCGCGGCCAGGAACTCGTA GGGCTCGCACCGAAGGCCCTGAACAAGGTGCGCGGCTCGAAGATCACCATGATCTTCCAGGAGCCGATGACCTCGCTCGA TCCGCTCTACACCATCGGCCGTCAGATCGCCGAGCCGATCGTCCATCACCGCGGCGGCAGCTTCAAGGAGGCTCGCAGGC GCGTCCTCGAGCTCCTGGAGCTCGTCGGCATTCCCGAGCCGGGGCGGCGCATCGACAGCTATCCGCACGAGCTTTCCGGC GGCCAGCGCCAGCGTGTCATGATCGCCATGGCGCTTGCCAACGAGCCGGATATCCTGATCGCCGACGAGCCGACGACCGC CCTTGACGTGACCATCCAGGCCCAGATCCTCGATCTGCTCAAATCGCTGCAAAGGCGCTTCGGCATGGCGATCGTGCTGA TCACCCACGACCTCGGCATCGTCAAGTACTTCGCCGACCGTGTCGCGGTCATGCGCCGGGGCGAGGTCGTGGAGCAGGGG ATGACGGCTGATATCTTCGAGCGGCCGAAGGGGGACTATACCAGGATGCTGCTGGAGGCCGAACCGAGCGGGCGCAAGGC TTCGCCCCCCGACAACGCCCCGATCATCCTGGAGGGTCGCAATGTCGCGGTGGACTATACGATCCCAGGCGGCCTCTTCC GCGGGGCCTCGGCCGCTTTCCGTGCCGTCGACGGCGTCAATCTTAGGCTCAGGCAGGGTCAGACGATCGGCATCGTCGGC GAATCCGGCTCCGGGAAATCGACGCTCGGCAGGGCGCTGCTGAGGCTTCTGCCGAGCAGCGGTTACTACCGTTTCGGCTC GACCGACATTTCCGGCTTTGACCGCGGCGCGATGCGGCCGCTGCGCCGCCAGCTGCAGCTCGTCTTTCAGGACCCCTACG GGTCGCTCTCGCCGCGCCGGACCGTGGGGGAGATCATCACCGAAGGCCTCCATGTGCATGAGCCCGACCTGAGCCGTGCC GATCGCGACCGCAGGGCCATCGCCGCGTTGAAGGAAGTCGGCCTCGATCCCGCGTCGCGCAACCGCTATCCGCATGAATT CTCCGGCGGACAGCGCCAGCGCATCGCAATCGCCCGCGCGATCATCCTGAAGCCGAAGGTCGTCATTCTCGACGAGCCGA CTTCGGCCCTCGACCGGTCGGTGCAGGGGCAGGTGATCGAACTCCTGCGCGATCTGCAGGAAAAGCACGGTCTCTCCTAC ATCTTCATCAGCCACGATCTTTCGGTGGTGAAGGCGATGTCTGACTATGTGATCGTGATGAAGAACGGCCGGATCGTCGA AGAGGGAGAAACGGACGCGATCTTCGATGCGCCGAGGGAGCCCTATACGAAGACGCTGATCGGCGCGGCGTTCAACGTGT GA Protein sequence : MTEMKDSILAVRGLKVDFYTPDGTVEAVKGIDLDVRSGETLAVVGESGSGKSQTMMGIMGLLAKNGTVTGSARYRGQELV GLAPKALNKVRGSKITMIFQEPMTSLDPLYTIGRQIAEPIVHHRGGSFKEARRRVLELLELVGIPEPGRRIDSYPHELSG GQRQRVMIAMALANEPDILIADEPTTALDVTIQAQILDLLKSLQRRFGMAIVLITHDLGIVKYFADRVAVMRRGEVVEQG MTADIFERPKGDYTRMLLEAEPSGRKASPPDNAPIILEGRNVAVDYTIPGGLFRGASAAFRAVDGVNLRLRQGQTIGIVG ESGSGKSTLGRALLRLLPSSGYYRFGSTDISGFDRGAMRPLRRQLQLVFQDPYGSLSPRRTVGEIITEGLHVHEPDLSRA DRDRRAIAALKEVGLDPASRNRYPHEFSGGQRQRIAIARAIILKPKVVILDEPTSALDRSVQGQVIELLRDLQEKHGLSY IFISHDLSVVKAMSDYVIVMKNGRIVEEGETDAIFDAPREPYTKTLIGAAFNV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 2e-92 | 44 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-72 | 42 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-72 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-72 | 42 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-72 | 42 |
