Gene Information

Name : kpsT,rkpS (SM2011_b20832)
Accession : YP_007613332.1
Strain :
Genome accession: NC_020560
Putative virulence/resistance : Virulence
Product : Capsular-polysaccharide-transporting ATPase
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.38
Position : 624305 - 624964 bp
Length : 660 bp
Strand : -
Note : corresponds to SMb20832

DNA sequence : 
ATGATCCGGTTCGAGCAGGCGACGAAATTTGCCCGCACCAAGGGCATCAAGAAGCCGATCATCGAGGATGCATCGCTGAC
GCTCAACCGCGGCAAGAGCGTCGGCCTGCTCGGCCGCAACGGCGCCGGAAAATCGACGCTGCTGCGCCTGATCGCCGGCG
CCATCAAGCTCGACAAGGGCCGAATCATCCGCCGCGGCAAGATTTCCTGGCCGCTCGGCTTTGCCGGCAGCTTTCAGCCA
TCGATGACGGGCGAGCAGAATGTGCGCTTCGTCGCCCGCATCTACGGTGTCGATACGGAGCAACTGATCGGATATGTCGA
GGAGTTCGCCGAGCTCGGCCCTTACTTCAAGGCCCCGGTCGGCACCTATTCCTCCGGCATGAAGGCACGCCTCGCCTTCG
GCTTGAGCATGGGCGTCAACTTCGACTATTATCTGGTCGATGAAATCACCGCCGTTGGTGACGCAAATTTTAAGAAAAAG
TGCCAGGCTGTCTTCGAGACCAGGCTGCAGGATTCAGATGTGGTCATGGTCTCGCACAGCACCGGCACGATCCGCGACTA
TTGCGATTGCGGCGTGGTGCTGGAAAAAGGCAAGATGACCTATTATGAGAATGTCGAAGACGCAATCCGCGCGCACGACA
AGAATATGAAGGAAAGCTAA

Protein sequence : 
MIRFEQATKFARTKGIKKPIIEDASLTLNRGKSVGLLGRNGAGKSTLLRLIAGAIKLDKGRIIRRGKISWPLGFAGSFQP
SMTGEQNVRFVARIYGVDTEQLIGYVEEFAELGPYFKAPVGTYSSGMKARLAFGLSMGVNFDYYLVDEITAVGDANFKKK
CQAVFETRLQDSDVVMVSHSTGTIRDYCDCGVVLEKGKMTYYENVEDAIRAHDKNMKES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 1e-50 50
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 5e-47 49
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 4e-47 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kpsT,rkpS YP_007613332.1 Capsular-polysaccharide-transporting ATPase VFG1449 Protein 4e-51 50
kpsT,rkpS YP_007613332.1 Capsular-polysaccharide-transporting ATPase VFG0258 Protein 2e-47 49
kpsT,rkpS YP_007613332.1 Capsular-polysaccharide-transporting ATPase VFG0696 Protein 3e-47 46
kpsT,rkpS YP_007613332.1 Capsular-polysaccharide-transporting ATPase VFG2563 Protein 8e-46 45