|
Name : agpD (SM2011_b21644) Accession : YP_007614318.1 Strain : Genome accession: NC_020560 Putative virulence/resistance : Unknown Product : ABC-type alpha-galactoside transport system,duplicated ATPase component Function : - COG functional category : - COG ID : - EC number : - Position : 1672434 - 1674104 bp Length : 1671 bp Strand : - Note : corresponds to SMb21644 DNA sequence : ATGGTAACGATCGAAAGCATTGTCCCGGCACCAGAGGAACGGCGCGACCGCGATATGAAAGATGAGAGGCCGGTGATCGA TGCCCGAAAGGTGGCGGTATCCTTCAAGGTCGAGAACGGCACGGTCCAGGCGGTGAAGGATGTTTCCTTCCAGCTTTACC GCGGCGAGACGGTGGCGATCGTCGGCGAATCCGGCTCCGGCAAGTCGGTGACCGCGCGCACCGTCATGGGGCTTCTGTCG AAGCGCGCTACGATCGCGCCGCAGGCGCGCATCGAATATGACGGCAGGGACGTGTTGAAATTCTCGAAGAGAGAGCGCCG GGCGCTGCGCGGCGACCGCATCTCGATGATCTTCCAGGAGCCGATGAGCTCGCTGAACCCGGTCTACACGATCGGCAGCC AGATCATCGAGGCGATCCGGGCGCATCGCCGCGTCAGCCGGCGCGCCGCCGCCGAGCGGGCGCTGGAGCTCTTGCGTCAT GTCCAGATCCCCGACCCGGAAGCACGGCTCAACCAGTATCCGCATCAGCTTTCCGGCGGCCAGCGTCAGCGCGTGATGAT CGCCATGGCTCTTGCCAACGATCCGGACGTGCTGATTGCCGACGAGCCGACGACGGCGCTCGACGTGACGGTGCAGGCGC AGATTCTCAACCTCATCCGCAAGCTGCAGCAGGAGCTCGGCATGGCGGTGATCCTGATCACGCATGACCTGACGGTGGTC CGCCAATTCTCCGATTACGTCTATGTCATGCAGCTCGGCGAAGTGAAGGAACACAACACGACCGAGGCGCTCTTTGCCGA TCCGCAGCACGCCTATACGCGGCGGCTGCTTTCCTCCGAACCCTCCGGTTCGGCCAATCCGCTGCCGGACGACGCGCCAA TCCTGCTCGACGGCCGCAATGTCCGTGTCTCCTTTACCTTGAAGAAAGGCGGGTTCTTCAGGCCGGAATTCAAGGAGCTC GTCGCGGTCGACGGGCTCAGCCTCAATCTTCGCCGGCACGAGACCCTCGGGCTCGTCGGCGAGTCCGGTTCCGGCAAGAC CACTTTCGGCCAGGCGCTGATCCGGCTTCTCAACACCGATGGCGGCGAGATCTATTTCGAAGGCGAGCCGATCCACGACA AGGACCGCAAGGGCATGCGGCCGCTTCGTTCGAAGATCCAGATCGTCTTTCAGGATCCCTTCTCCTCGCTCAACCCGCGA ATGTCGGTCGGCCAGATCATAGAGGAGGGTCTGATCGTCAACGGCATGGGCGAAAACCGAAAGGACAGGCTGAAACGGGT CGAGGACGCGCTTGTCAGCGCCGGCATGCCGTCGAACATCCTTTCGCGCTTCCCGCACGAATTTTCCGGTGGCCAGCGCC AGCGCATCGCGATCGCCCGCGCCGTCGCGCTGGAACCGGAATTCATCCTGCTCGACGAGCCGACCTCGGCGCTCGACCTC TCGGTGCAGGCGCAGATCATCGAACTCCTGCGCCGGCTGCAGGACGAGCGCGGCCTGAGCTATCTCGTCATCTCCCACGA CCTGAAAGTCGTGCGCGCGCTCTGCCACCGCGTGGTCGTCATGCAGGACGGCAAGATCGTCGAAGAGGGGCCGGTGAGCG AAGTCCTCAACAATCCCAAGACTGCCTACACGGAGCGGCTGGTAAAGGCCGCCTTCGAAGTGGCCGCGTGA Protein sequence : MVTIESIVPAPEERRDRDMKDERPVIDARKVAVSFKVENGTVQAVKDVSFQLYRGETVAIVGESGSGKSVTARTVMGLLS KRATIAPQARIEYDGRDVLKFSKRERRALRGDRISMIFQEPMSSLNPVYTIGSQIIEAIRAHRRVSRRAAAERALELLRH VQIPDPEARLNQYPHQLSGGQRQRVMIAMALANDPDVLIADEPTTALDVTVQAQILNLIRKLQQELGMAVILITHDLTVV RQFSDYVYVMQLGEVKEHNTTEALFADPQHAYTRRLLSSEPSGSANPLPDDAPILLDGRNVRVSFTLKKGGFFRPEFKEL VAVDGLSLNLRRHETLGLVGESGSGKTTFGQALIRLLNTDGGEIYFEGEPIHDKDRKGMRPLRSKIQIVFQDPFSSLNPR MSVGQIIEEGLIVNGMGENRKDRLKRVEDALVSAGMPSNILSRFPHEFSGGQRQRIAIARAVALEPEFILLDEPTSALDL SVQAQIIELLRRLQDERGLSYLVISHDLKVVRALCHRVVVMQDGKIVEEGPVSEVLNNPKTAYTERLVKAAFEVAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 5e-94 | 43 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-69 | 42 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-69 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-69 | 42 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-69 | 42 |
