Gene Information

Name : BN419_0345 (BN419_0345)
Accession : YP_007605659.1
Strain : Listeria monocytogenes N53-1
Genome accession: NC_020558
Putative virulence/resistance : Unknown
Product : Ribosomal RNA large subunit methyltransferase H
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 301336 - 301800 bp
Length : 465 bp
Strand : +
Note : -

DNA sequence :
ATGAATATCCAAATTGTAACGGTCGGGAAATTAAAAGAAAAATATTTAGTGCAAGGAATCGCCGAATATTTAAAACGATT
GAGCGCCTATGCGAAAGTGACGATTGTGGAAGTTCCGGATGAGAAAGCTCCAGAAGTGCTGAGTGATGCGGAAATGAAGC
AAGTGAAAGATAAAGAGGGTGCGCGGATTTTAGCGAAGATTCCGGACGATGCCCATGTGATTGCGCTGGCGATTGATGGG
AAAATGAAGTCGAGTGAAGAATTTGCGGCGGATTTGGATAAGCTGGCGACTTATGGTAAGAGTAAGGTGACGTTTGTGAT
TGGTGGATCGCTGGGACTTAGTGAGGCGGTGCTGAAGCGGAGTAATGAGCGGATTTCGTTTGGTGCCACACCAGTTGATG
AGATTGGTGCTGGTGGAGCAGGTTTACCGGGCGTTTCGGATTGTTCGGGGGGAGCCTTATCATAA

Protein sequence :
MNIQIVTVGKLKEKYLVQGIAEYLKRLSAYAKVTIVEVPDEKAPEVLSDAEMKQVKDKEGARILAKIPDDAHVIALAIDG
KMKSSEEFAADLDKLATYGKSKVTFVIGGSLGLSEAVLKRSNERISFGATPVDEIGAGGAGLPGVSDCSGGALS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orfX YP_251938.1 rRNA large subunit methyltransferase Not tested SCCmec Protein 4e-30 61
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 1e-29 60
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 1e-29 60
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 1e-29 60
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 1e-29 60
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 1e-29 60
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 1e-29 60
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 1e-29 60
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 1e-29 60
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 1e-29 60
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 1e-29 60
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 1e-29 60
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 1e-29 60
orfX AAL26648.1 unknown Not tested SCCcap1 Protein 2e-29 59
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 4e-29 58
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 4e-29 58
orfXhom BAB83497.1 open reading frame X Not tested SCC 12263 Protein 3e-25 58
SSP0026 YP_300116.1 rRNA large subunit methyltransferase Not tested SCC15305RM Protein 1e-28 58