Gene Information

Name : BN419_1530 (BN419_1530)
Accession : YP_007606767.1
Strain : Listeria monocytogenes N53-1
Genome accession: NC_020558
Putative virulence/resistance : Resistance
Product : Putative arsenical pump membrane protein YdfA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1225350 - 1226645 bp
Length : 1296 bp
Strand : +
Note : -

DNA sequence : 
ATGCAGATTACTTTAGCTATTTTAGTATTTGTCCTAACGCTGTTTTTCGTAATTTGGCAGCCAAGAAAATTATCGATTGG
ATGGTCAGCTTGTGGCGGAGCGTTAATCGCATTATTACTTGGTGTTGTCACCTTAGCTGATGTTATGACAGTTACAGGGA
TTGTATGGAATGCGACACTTGCTTTTATTGCGATTATAATCATTTCACTCATTTTAGATGAAATTGGATTTTTTGAGTGG
GCGGCCCTACATATGGCACGTTTAGCAAGAGGGAATGGATTATTAATGTTTATTCTTATTTCTATTTTGGGTGCTCTTGT
CGCGGCACTGTTTGCTAATGACGGAGCGGCATTGATTCTGACGCCAATTGTTTTAGCAATGGTGCGAGCGCTGGATTTTG
ATGAGAAAAAGGTGTTTCCATTTATTATAGCTAGTGGATTTATAGCGGATACAACATCCTTGCCACTTGTAGTTAGTAAT
TTAGTTAATATTGTTTCAGCTGATTTTTTTGGCATTAGTTTTTCACGGTATGCACTCATTATGTGGATCCCTACTATTTT
TTCATTAGTTGCAAGTATTATCATTTTATATATCTATTTCCGAAAAGCTTTACCGAGAAAATACGATGTAAATGCGATTC
AAAAGCCAGCTTCAGCACTTAAAGATAGGAAGATGTTTCATATTTCTTGGGGAATCCTTACTATTCTTGTAGTAGGCTAT
TTTTTAAGTAGTTTTTTAGATATACCAGTGTCGTTTATTGCTTTACTAGTCGCTCTAATTTTCTTGTTAGTTGGTGCAAA
AAGCCACTCCGTTTCAACAAAAGCTATTCTAAAAGGAGCACCTTGGAGCATTGTTTTTTTCTCAGTTGGTATGTATGTGG
TTGTGTATGGCTTGCAAAATGTTGGAATCACCAAACTATTATCAGAAGCTATTACCTATGTCGCGCACTTTGGTTTATTT
GCCGGAACAATCGGAATGGGTTTCATTGCTGCGATACTATCGTCTGTCATGAATAATTTGCCTACCGTGATGATAAATGC
GCTAGCAATCGATCATACTTCATTTACCGGAGTAATGAAAGAGGCGCTAGTATATGCAAATGTTATTGGTTCGGATCTAG
GACCTAAAATAACACCCATTGGCTCGCTCGCAACTTTACTTTGGTTACATGTGTTAGCTCAGAAAGGCATAAAGATAAGT
TGGGCGTCATACTTCAAAATTGGTATTGTCATTACTATTCCTGTTTTGTTCATTACGCTCGTAGGCTTATACGTATCATT
ACTTATTTGGAACTAA

Protein sequence : 
MQITLAILVFVLTLFFVIWQPRKLSIGWSACGGALIALLLGVVTLADVMTVTGIVWNATLAFIAIIIISLILDEIGFFEW
AALHMARLARGNGLLMFILISILGALVAALFANDGAALILTPIVLAMVRALDFDEKKVFPFIIASGFIADTTSLPLVVSN
LVNIVSADFFGISFSRYALIMWIPTIFSLVASIIILYIYFRKALPRKYDVNAIQKPASALKDRKMFHISWGILTILVVGY
FLSSFLDIPVSFIALLVALIFLLVGAKSHSVSTKAILKGAPWSIVFFSVGMYVVVYGLQNVGITKLLSEAITYVAHFGLF
AGTIGMGFIAAILSSVMNNLPTVMINALAIDHTSFTGVMKEALVYANVIGSDLGPKITPIGSLATLLWLHVLAQKGIKIS
WASYFKIGIVITIPVLFITLVGLYVSLLIWN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 4e-122 67
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 2e-116 65
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 5e-116 64
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 4e-95 57

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BN419_1530 YP_007606767.1 Putative arsenical pump membrane protein YdfA BAC0574 Protein 1e-118 65
BN419_1530 YP_007606767.1 Putative arsenical pump membrane protein YdfA BAC0575 Protein 6e-118 65
BN419_1530 YP_007606767.1 Putative arsenical pump membrane protein YdfA BAC0578 Protein 6e-95 58
BN419_1530 YP_007606767.1 Putative arsenical pump membrane protein YdfA BAC0577 Protein 2e-96 58
BN419_1530 YP_007606767.1 Putative arsenical pump membrane protein YdfA BAC0576 Protein 5e-95 58
BN419_1530 YP_007606767.1 Putative arsenical pump membrane protein YdfA BAC0031 Protein 2e-92 57