Gene Information

Name : BN418_1988 (BN418_1988)
Accession : YP_007604084.1
Strain : Listeria monocytogenes La111
Genome accession: NC_020557
Putative virulence/resistance : Resistance
Product : Cystathionine beta-lyase metC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1622349 - 1623521 bp
Length : 1173 bp
Strand : -
Note : -

DNA sequence :
GTGGCTAAAGAATACGCGCAAGATACGGCTGTAATTAAAGCGAGCCTCGGGATTGATAAAGAAACAGGTGCGCTTAATAC
GCCGATTCATTTATCTTCTACTTTCCATCAACATGATTTTGATAACTACCATGCTTATGATTATGCAAGAAGTGGAAACC
CAACCAGGGAAAAAGTGGAACAGGCGATTGCAGAATTGGAAGGTGGTACGAATGGTTTTGCCTTTGCTAGTGGAATGGCG
GCTGTTTCTGCGGTACTTTTTACGCTTTCAAAAGGAGATCATTTTATTATTGCAAAAGATGTGTACGGCGGGACGTTTCG
TTTGGTGGAACAAGTGTTGCCGCGGTTTGGGATTACGCATACTTTTGTTGATACAACAAATATTGACGAGGTTGCTAAGG
CGTTTCAAGCAAATACAAAATTGGTTTATTTGGAAACTCCTTCTAATCCGCTGCTACATGTGACGGATATTCGCACAGTT
GCTAAACTTGCGAAAGCGAATGGTTGCTATACATTTGTCGATAATACATTTTTAACGCCGCTGATTCAAAAACCGTTAGA
ATTAGGTGCGGACTTAGTTATCCATAGTGCGACGAAATTTCTTGGTGGGCATAGTGATATTTTGGCGGGGCTAATTGTCA
CAAATAATCCTAATCTTGCTGAAGCAGTGTACTTTTTGCAAAATTCGACTGGTGGGGTTCTTGGAGTGCAGGATTCGTGG
TTGTTATTGCGCGGACTAAAAACACTTTCTGTGCGGATGAAGGCTGGGACGGAAACGGCGGAGAAAATTGCGCTATTTTT
AAATGCGGAGCCAGATGTGGTTGCGGTGCATTATCCGGGGTTACCGTCGCATGCTGGGTATGACATTCAAGTGGAACAGG
CGACAAGTGGCGGGGCTGTTTTATCGTTTGATTTAGGCAGTGAGGAAGCGGTGCGAGAACTAGTTACACATTTGGAATTG
CCAGTGTTCTCTGTGAGTCTAGGTGCGGTCGAGAGTATTCTTTCTTACCCGGCTAAAATGTCTCATGCGGCTGTTCCGGA
AGAGGAACGTTTGGCGCAAGGGATTACGCCAGGATTATTACGTTTTTCAGCTGGACTAGAAGATGCTGAAGACTTGATTG
CAGATTTAAAACAAGCACTTTCATTCATTAAGAAGGGAAGTGTTGCGAAGTGA

Protein sequence :
MAKEYAQDTAVIKASLGIDKETGALNTPIHLSSTFHQHDFDNYHAYDYARSGNPTREKVEQAIAELEGGTNGFAFASGMA
AVSAVLFTLSKGDHFIIAKDVYGGTFRLVEQVLPRFGITHTFVDTTNIDEVAKAFQANTKLVYLETPSNPLLHVTDIRTV
AKLAKANGCYTFVDNTFLTPLIQKPLELGADLVIHSATKFLGGHSDILAGLIVTNNPNLAEAVYFLQNSTGGVLGVQDSW
LLLRGLKTLSVRMKAGTETAEKIALFLNAEPDVVAVHYPGLPSHAGYDIQVEQATSGGAVLSFDLGSEEAVRELVTHLEL
PVFSVSLGAVESILSYPAKMSHAAVPEEERLAQGITPGLLRFSAGLEDAEDLIADLKQALSFIKKGSVAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-82 49
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-83 49
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 6e-81 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BN418_1988 YP_007604084.1 Cystathionine beta-lyase metC BAC0207 Protein 1e-59 43