Gene Information

Name : BN418_1545 (BN418_1545)
Accession : YP_007603649.1
Strain : Listeria monocytogenes La111
Genome accession: NC_020557
Putative virulence/resistance : Virulence
Product : Uncharacterized protein ybdM
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1233132 - 1233638 bp
Length : 507 bp
Strand : -
Note : -

DNA sequence :
ATGAATTATAAAAGCCCAGTGTATAGTGTCACCCCCATTCACTACACAAAATTACAAGCAAATAATTATAATCCAAACAC
CGTCCCCGCAACCGAACTCAAACTACTTGAAAAATCAATTTGGGAAGATGGTTTTACGCAACCAATTGTTTGTTATCCCT
TGGAAGACAGCGATAAATATGAAATAATAGATGGGTTCCACCGTTACACTATTATGATCACTTCTAAACGAATTCGTGAA
CGGGAAAATGAATTCCTGCCAGTAGTCATCTTAGAAAAAGACACCGTGAATCGAATGGCCTCTACAATACGTCATAATCG
TGCACGCGGATTTCATAATGTCGAATTAATGTCCAACATTGTTAGTGAACTTGTAGATAGCGGGATGTCCGATAGTTGGA
TTATGAAAAATATTGGAATGGATGCTAATGAAATCTTACGCTTAAAACAAGTGAGCGGACTTGCTCACCTCTTCTTAGAT
AAAGAATTCAGTCACACATCTGATTAA

Protein sequence :
MNYKSPVYSVTPIHYTKLQANNYNPNTVPATELKLLEKSIWEDGFTQPIVCYPLEDSDKYEIIDGFHRYTIMITSKRIRE
RENEFLPVVILEKDTVNRMASTIRHNRARGFHNVELMSNIVSELVDSGMSDSWIMKNIGMDANEILRLKQVSGLAHLFLD
KEFSHTSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0164 YP_281528.1 parB-like nuclease Not tested Not named Protein 2e-41 56
EF0607 NP_814365.1 ParB-like nuclease domain-containing protein Not tested Not named Protein 1e-31 50
ef0120 AAM75321.1 EF0120 Not tested Not named Protein 9e-32 50
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 6e-23 45
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 6e-23 45
STY4584 NP_458668.1 conserved hypothetical protein Not tested SPI-7 Protein 3e-24 44
t4278 NP_807876.2 hypothetical protein Not tested SPI-7 Protein 3e-24 44
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 3e-23 43
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 3e-23 43
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 5e-24 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BN418_1545 YP_007603649.1 Uncharacterized protein ybdM VFG1505 Protein 2e-24 43