Gene Information

Name : BN418_1278 (BN418_1278)
Accession : YP_007603396.1
Strain : Listeria monocytogenes La111
Genome accession: NC_020557
Putative virulence/resistance : Resistance
Product : Regulatory protein VanRB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1013346 - 1014008 bp
Length : 663 bp
Strand : +
Note : -

DNA sequence : 
ATGGAAAAAATACTCATTGCAGAAGATGATTCAGCTATTTTAGGAGTTATTACAGCATTCTTAACCGAAGCAGGGTATCA
AGTAATGACAGCTAAAAATGGAATAGAAGCATATCATCTATTTCAAAAGGAAACATTTGATTTAATTATTATGGATATTA
TGATGCCGAGTATGGACGGGTACACACTAACAGAACTGATTCGTTCTACTTCAACCACACCGATACTTATGATGACGGCG
CTCTCCGAAGAAGATGACGAGTTGAAAGGCTTTGATCTAGGGGCGGACGACTATATACAAAAACCATTCTCTTATTTAGT
ATTATTAAAACGAGTGCAAGTACTTTTGAGACGAGTGAACCAAAGTGAAACAAAGAAGCAAATACTACGATGCGGAAATA
TTTCTGTAGATACCGAAACCTTTGAAGTGATTTCAGCTGGAGAAACAATCGAATTAACGAAAAAAGAATTTGATATTTTA
GTACTCCTGATTAAAAATCAAAAGAAGGTGATTACTCGTGAAATGATATTGTCGCAAGCATGGGATTTCGCAGCTATTGT
GGATACGTCCATTATCAATACGCATATGAAAAATCTACGCAAAAAACTGCACACTGAAAAAATTCAAACGATTAGAGGTG
CTGGCTATAAAATGGATGAATAA

Protein sequence : 
MEKILIAEDDSAILGVITAFLTEAGYQVMTAKNGIEAYHLFQKETFDLIIMDIMMPSMDGYTLTELIRSTSTTPILMMTA
LSEEDDELKGFDLGADDYIQKPFSYLVLLKRVQVLLRRVNQSETKKQILRCGNISVDTETFEVISAGETIELTKKEFDIL
VLLIKNQKKVITREMILSQAWDFAAIVDTSIINTHMKNLRKKLHTEKIQTIRGAGYKMDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 3e-42 42
vanRB YP_001698483.1 regulatory protein Not tested Not named Protein 2e-30 41
vanRB NP_815956.1 DNA-binding response regulator VanRB Not tested Not named Protein 1e-39 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BN418_1278 YP_007603396.1 Regulatory protein VanRB HE999704.1.gene1202. Protein 2e-91 100
BN418_1278 YP_007603396.1 Regulatory protein VanRB AF310956.2.orf0.gene Protein 1e-42 42
BN418_1278 YP_007603396.1 Regulatory protein VanRB U35369.1.gene1.p01 Protein 4e-40 41
BN418_1278 YP_007603396.1 Regulatory protein VanRB AE016830.1.gene2255. Protein 4e-40 41
BN418_1278 YP_007603396.1 Regulatory protein VanRB BAC0347 Protein 3e-28 41