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Name : hslU (HCBAA847_0584) Accession : YP_007600457.1 Strain : Helicobacter cinaedi ATCC BAA-847 Genome accession: NC_020555 Putative virulence/resistance : Unknown Product : ATP-dependent protease ATP-binding subunit Function : - COG functional category : - COG ID : - EC number : 3.4.21.53 Position : 578525 - 579853 bp Length : 1329 bp Strand : + Note : similiar to HCN_0551 of H. cinaedi PAGU611 DNA sequence : ATGAAAGAAAATATGACACCAAAGCAGATTGTAGAATATCTTGATGGCTATATTATAGGGCAGAGTGAAGCCAAAAAGGC TGTGGCGATTGCGTTAAGAAACCGCTATCGTAGAATGAAGCTTGATAAGGAAGTGCAAGATGAGATAACGCCTAAAAATA TTTTGATGATTGGCTCAACAGGTGTGGGAAAAACGGAAATTGCACGGAGAATGGCAAAAATGATGGGATTACCCTTTGTC AAAGTAGAAGCGAGTAAATACACGGAAGTGGGCTTTGTAGGGCGAGATGTGGAATCTATGGTGCGAGATTTAGTCTTAGC GAGTGTGAATCTTGTAGAAAATGAGCATAGACAAAAAGCACAAGCGGAGATTAATGACTACATTATTGAAAAAATTACCA AAAAGCTTTTGCCACCATTGCCGCAAGGGGCGAGTGAATCTAAGCAAAATGAATATGACATAAGCTTTGCTAAAATGAAG CAAAAAGTGCTTAAAGGCGAAGTGGATGAGCTAAAAATTGAAATAGAGATAAGCAAAAAGGCACAAGTGGGCGATGATAA TCTGCCACCAGATATGATAAAAGTCCAAGAGTCCATTTTTAAGGTGCTAAATGTTACAAATGATAAGGTTAAAAAGGAAG TGAGTGTCAAAGAGGCAAAAGAAGCTTTGATGTATGAAGCCACAGAATCTGTGTTAGATTCAGAAGCTATACGAGCAGAG GGGCTAAAAAGGGCAGAATCTAATGGTGTAATTTTTATTGATGAGATTGATAAGGTCGCCGTGGGGAGCAAAGATAGCTC AAGGCAGGATCCTAGTAAAGAGGGCGTGCAAAGGGATTTGTTGCCTATTGTTGAAGGTAGTGTGGTCAATACAAAATATG GGCAGATAAAGACAGATTATATTTTGTTTATCGCCGCAGGGGCGTTTCACTTTAGCAAACCAAGTGATTTGATACCAGAA TTGCAGGGGCGATTTCCCTTGCGTGTGGAGCTAGATTCACTCAACGAAGAGAGTTTGTATAAGATTCTAACCCAAACAAA AAGCTCACTTTTGCGGCAGTATCAGCTCTTACTTGATACAGAAAATATTAGGCTTGAATTTAGCGATGAGGCTATACGCG AGATAGCAAAGCTCTCTCATAGTGCCAATGAACGCACAGAAGATATTGGTGCAAGGCGGTTGCATACGACTATTGAACGA GTGCTAGAAGAGATTAGCTTTAATATTGATACCTATCAGGGCAAGGAAGTTACCATTACCGCGGAGATGGTGAAAGAGCG ATTAGGAGATGTGGTAGAAAATGTGGATTTGGCACGATATATTCTCTAG Protein sequence : MKENMTPKQIVEYLDGYIIGQSEAKKAVAIALRNRYRRMKLDKEVQDEITPKNILMIGSTGVGKTEIARRMAKMMGLPFV KVEASKYTEVGFVGRDVESMVRDLVLASVNLVENEHRQKAQAEINDYIIEKITKKLLPPLPQGASESKQNEYDISFAKMK QKVLKGEVDELKIEIEISKKAQVGDDNLPPDMIKVQESIFKVLNVTNDKVKKEVSVKEAKEALMYEATESVLDSEAIRAE GLKRAESNGVIFIDEIDKVAVGSKDSSRQDPSKEGVQRDLLPIVEGSVVNTKYGQIKTDYILFIAAGAFHFSKPSDLIPE LQGRFPLRVELDSLNEESLYKILTQTKSSLLRQYQLLLDTENIRLEFSDEAIREIAKLSHSANERTEDIGARRLHTTIER VLEEISFNIDTYQGKEVTITAEMVKERLGDVVENVDLARYIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 3e-143 | 69 |
