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Name : actP (HCBAA847_0523) Accession : YP_007600401.1 Strain : Helicobacter cinaedi ATCC BAA-847 Genome accession: NC_020555 Putative virulence/resistance : Resistance Product : acetate permease Function : - COG functional category : - COG ID : - EC number : 3.6.3.- Position : 518857 - 520515 bp Length : 1659 bp Strand : + Note : similiar to HCN_0497 of H. cinaedi PAGU611 DNA sequence : ATGAAAAATGCAAAACTTTTGGTTGCAGGGTTAGGCTTATTAGCAGGTGGCTCTGCATTTGGTGCGGCTTTTGATGCAGG TGGTGCAAAGGCAGATGTGAATCCGGTTGCTATCGGTATGTTTTTAGCCTTTGTTTTGGCAACATTATTTATTACCTATT TATCTAATAAAAAGAGTCAATCCGCAAGCGGTTTCTACACTGCTGGTGGCAATATTACAGGTATGCAAAATGGTATTGCG ATTGCTGGGGATTATATGAGTGCTGCGAGTTTTTTGGGTATTACAGCGTTAGTTTTTACAAATGGATTTGATGGGCTAAT CTACTCTATTGGATTTTTGGTTGGGTGGCCTATTATATTGTTTCTAATCGCTGAAAAGTTCCGCAATCTTGGGAAATTTA CCTTCGCTGATATTACCGCATATCGCCTTGATGCAAAGCCTATCCGCGTTATCTCTGCCATTTCAGCATTAAGCGTGATT GTATTTTACCTTATCGCTCAAATGGTTGGAGCAGGGCAGCTCATACAAGTGCTTTTTGGACTTCCTTATGGCGTTGCTGT GATTTTAGTTGGGATTTTGATGATTTGCTATGTTGTCTTTGGCGGAATGCACGCGACAACTTGGGTGCAAATCATCAAGG CTGTGCTGCTTTTGGCAGGGGCTAGTTTTATGGCGATTATGGTGTTGTATTTGACAAAATTTGATCTTACTTATTATTTT TCACAAGCCATTTCTCATCACCCAAAAGGTGAAGCGATTATGTCGCCGGGTGCGTTTTTGCCCGATACGATTTCTGCCCT TTCACTTGGACTTGCTTTGATGTTTGGGACAGCAGGATTGCCACATATTTTAATGCGATTTTTCACGGTGAAAGACGCAA AAGAGGCTAGAAAATCAGTGTTCTACGCCACAGGGCTTATTGGGTATTTTTATATCCTTACCTTTATCATCGGCTTTGGG GCTATCGCTTTGCTTTATGGGAATCCTGAATTTACAAAGCCCGATGGCTCTTATAGTGGTGTGGCAAATATGGTAGCAAT CAGCTTGGCTGAAGTGCTTGGTGGCAATGTCTTTTTAGGCTTTATTTCAGCGGTGGCATTTGCTACGATTTTAGCGGTAG TCTCGGGTCTTGCGATTTCTGGGGCTGGGGCTATAAGCCACGACTTGTTTGTGAATGTCTGCAAAGATGGCAAATGCGAT TCTAAATTAGAGATGAGAGTAACAAAAGGTGCGACTATATTCTTAGGGGTTTTAGCTATCGCGTTAGGATTCTTGTTTGA AAAGCAAAATATCGCCTTTATGGTGGGACTTGCGTTTGCGATTGCTGCGAGTGTGAATTTCCCTATTTTGTTGCTTTCAA TCTATTGGAAAAATCTTACAACTCAAGGTGCGTTTTGGGGTGGGCTGATAGGACTTGTTGTAGTGCTGACACTTGTTGTT TTAAGTCCTAGCATTTGGGTGAAAAGCTTTGGCTTTGAAGTGGCTATTTTCCCTTATGATCATCCGGCAATTTTTACAAT GCCTCTGACTTTTATAGAAATTTTTATTATCTCTAAGCTTGATGGCCCTAAACGAGCGGAGATTGATAGAAGTGGCTTTG AATCTCAAGACTTCCGCGCTCAAAGCGGTGTCGGTGCAAGTGAAGCGGTGTCTCACTAA Protein sequence : MKNAKLLVAGLGLLAGGSAFGAAFDAGGAKADVNPVAIGMFLAFVLATLFITYLSNKKSQSASGFYTAGGNITGMQNGIA IAGDYMSAASFLGITALVFTNGFDGLIYSIGFLVGWPIILFLIAEKFRNLGKFTFADITAYRLDAKPIRVISAISALSVI VFYLIAQMVGAGQLIQVLFGLPYGVAVILVGILMICYVVFGGMHATTWVQIIKAVLLLAGASFMAIMVLYLTKFDLTYYF SQAISHHPKGEAIMSPGAFLPDTISALSLGLALMFGTAGLPHILMRFFTVKDAKEARKSVFYATGLIGYFYILTFIIGFG AIALLYGNPEFTKPDGSYSGVANMVAISLAEVLGGNVFLGFISAVAFATILAVVSGLAISGAGAISHDLFVNVCKDGKCD SKLEMRVTKGATIFLGVLAIALGFLFEKQNIAFMVGLAFAIAASVNFPILLLSIYWKNLTTQGAFWGGLIGLVVVLTLVV LSPSIWVKSFGFEVAIFPYDHPAIFTMPLTFIEIFIISKLDGPKRAEIDRSGFESQDFRAQSGVGASEAVSH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01502.1 | putative amino acid transport protein | Not tested | PAGI-1 | Protein | 1e-124 | 55 |
| cur_1523 | YP_001800917.1 | transporter | Not tested | Not named | Protein | 1e-81 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| actP | YP_007600401.1 | acetate permease | BAC0564 | Protein | 2e-145 | 63 |
| actP | YP_007600401.1 | acetate permease | BAC0570 | Protein | 2e-143 | 62 |
