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Name : glnA (HCBAA847_0399) Accession : YP_007600277.1 Strain : Helicobacter cinaedi ATCC BAA-847 Genome accession: NC_020555 Putative virulence/resistance : Virulence Product : glutamine synthase Function : - COG functional category : - COG ID : - EC number : 6.3.1.2 Position : 389180 - 390619 bp Length : 1440 bp Strand : - Note : similiar to HCN_0374 of H. cinaedi PAGU611 DNA sequence : ATGAGTAGAGTAAGCGTAGATAAGACAAAAGTGGCGGAGTTTTTTAGATTCTGCGATGAAAATGAAGTGGAGTTTATAGA CTTTAGGTTTAGCGATATTAAGGGCGTGTGGCATCACGTGAGCTTTTCACGAAATGCGATTGATGAAGGAAGCTTTGAAG GTGTGCCTTTTGATGGTAGCTCAATCCCTGCGTGGCAGAGTGTGGATAAATCGGATATGATTCTTATACCCGATCCGGTG CGATATTTTATCGATCCTTTTACTGCGGATACAACGGTGGTGGTGTTTTGCGATATTTGGGACATTTATAAAAATGAGCC GTATGAAAAATGCCCTAGAAGCATTGTAAAAAGGGCGATGAAATTTTTACAAGAGAGTGGAATCGGCGATGTGGCGTATT ATGGACCAGAGAATGAGTTTTTCGTCTTTGATTCTATTAAGATAAAAGATGCGGTGAATTGCCAATACTATGAGATAGAT TCTGAAGAGGGCGAGTGGAATCGTGCTAGAGAATTTGAAGGTGGTGTGAATATGGGACATCGCCCCGGGACTAAGGGTGG CTACTTTCCCGTAGCTCCTGTGGATACGATGGTGGATTTGCGTGCAGAAATGGTAAAGGTGCTAAATCAAGTGGGGCTAG AAACCTTTGTCGTGCATCACGAAGTGGCACAGGGGCAAGGGGAGATTGGCGTAAAATTTGGTGATATGTTAGAAGCGGCT GATAATGTGCAAAAGCTTAAATATGTTGTCAAAATGGTAGCACATTTAAATGGCAAAACTGCAACCTTTATGCCAAAACC TTTGTATGGCGATAATGGCAGCGGAATGCACGTGCATATCAGCATTTGGAAAGATGGCAAAAATCTCTTTGCTGGAGATT CTTATCAAGGTTTAAGTGATATGGCATTGCATTTTCTAGGCGGTGTGCTTAAACACGCAAGGGCGTTAGCTGCTTTTACA AATCCTAGCACAAACTCATACAAACGCCTAATCCCGGGCTTTGAAGCACCAAGCATTTTAACTTACTCCGCACAAAATCG CTCTGCAAGTATTAGAATCCCTTACAACAGCGGTGAGAAAGCTAAAAGAATGGAGTTTAGATTCCCTGATAGCTCGGCAA ATCCTTATCTTGCCTTTGCAAGTTTGCTGCTCGCAGGGATTGATGGGATTAAAAATAAAATTGAACCCGGTGAGCCAATG GAGATAAATCTTTTTGAACTAACATTAGATGAGATTAGAGAAAAAGGCATTAAGCAGTTACCTCACACACTTCGCCACGC CATTGAAGAAATGCTTGTTGATAGAGCATATCTCAAGGAGGGCGGCGTATTTAGCGAAGAGTTTATCCAAACCTACAAAG CTTATAAATTTGAAACTGAAATCTGGCCTTGGGAAGCCCGCCCCCACCCATTTGAGTTTTTAACGACTTATAGTTGTTAG Protein sequence : MSRVSVDKTKVAEFFRFCDENEVEFIDFRFSDIKGVWHHVSFSRNAIDEGSFEGVPFDGSSIPAWQSVDKSDMILIPDPV RYFIDPFTADTTVVVFCDIWDIYKNEPYEKCPRSIVKRAMKFLQESGIGDVAYYGPENEFFVFDSIKIKDAVNCQYYEID SEEGEWNRAREFEGGVNMGHRPGTKGGYFPVAPVDTMVDLRAEMVKVLNQVGLETFVVHHEVAQGQGEIGVKFGDMLEAA DNVQKLKYVVKMVAHLNGKTATFMPKPLYGDNGSGMHVHISIWKDGKNLFAGDSYQGLSDMALHFLGGVLKHARALAAFT NPSTNSYKRLIPGFEAPSILTYSAQNRSASIRIPYNSGEKAKRMEFRFPDSSANPYLAFASLLLAGIDGIKNKIEPGEPM EINLFELTLDEIREKGIKQLPHTLRHAIEEMLVDRAYLKEGGVFSEEFIQTYKAYKFETEIWPWEARPHPFEFLTTYSC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 0.0 | 73 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| glnA | YP_007600277.1 | glutamine synthase | VFG1399 | Protein | 2e-99 | 49 |
