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Name : lldP (HCBAA847_0307) Accession : YP_007600188.1 Strain : Helicobacter cinaedi ATCC BAA-847 Genome accession: NC_020555 Putative virulence/resistance : Unknown Product : L-lactate permease Function : - COG functional category : - COG ID : - EC number : - Position : 295020 - 296669 bp Length : 1650 bp Strand : + Note : similiar to HCN_0302 of H. cinaedi PAGU611 DNA sequence : ATGGAAGTATGGCAACAAGTCTATGACCCATTTAACAGCATTTGGCTAAGTGCAGCCGTGGCATTTCTGCCGATTGCTTG TTTTTTGGTGTGTTTGTTAGTTTTTAAGCTCAAAGGGTATCAAGCGGGGTTTCTTACCGTTGTGTTGGCTTCAGTTTTGG CAGTTGTTGCTTATGATATGCCTTTTTCTCTTGTTGGAGCGAGTTTTGTTCAAGGATTTGCACAAGGTATTTGGCCTATT GCGTGGATCATCATCGCGGCAATTTTCTTGTATAAACTCTCTGTCAAATCCGGTGCATTTGAGGTGATTAAATCAAGCGT TATCACTATAACGCCAGATCACAGAATCCAAGTGATTTTGATAGGATTCTGCTTTGGCTCATTTTTAGAGGGTGCGATAG GCTTTGGCGGTCCTGTGGCGATTACTGCAGCATTACTTGTGGGCTTGGGACTTCGTCCATTATATGCAGCAGGGCTATGC CTGATTGCCAATACTGCACCTGTGGCATTTGGTGCTGTTGGGATTCCAATCATTGCGATGACAAATCTCGTGCGTATTGA GCAGTATGCGGTTGCGGCGATGGTTGGGCGTATGCTTGTGCCTTTGAGCTTGACAATTCCTTTTTTCATCGTATTTTTGA TGGACGGATTTAAGGGTGTGAGAGAGACTTTCCCAGCGATTTTGATCGCTGCTATAAGTTTCACAGGGACACAATATTTT AGCTCAAATCATTGGGGTGCGGAATTGCCAGATATTGTTTCTGCGATTGTTTCACTCCTTTGCACCACACTCTTTTTGCG TATTTGGCAGCCAAAAAATATTTTTAGGCTTGATGATGAAAAAGATTTCTCTAAGAAAAGCACCTTGAGTGTAGGGCAGA TTTTCAAGGCGTGGTTGCCTTTTGTGTTGCTTATTGTGTGTATTGTTATTTGGACACAGCCTTGGTTTAAGGCTCTTTTT GAAGAAGGTGCGATTTTTGACTACACACAAGTAACAATTGCCTTTGATAATATCGCTTTGTCAATCGTAGATCCAAAAGG TGCGGCTGTTTCTTTGGCACTTCCTGTGAATTTTATCGCACTCCAAGCAGGGACGGCGATTTTGGTTGCGGCATTTTTGA CAATTCTTTTCTTGCGTATCAAATCAAGCGATGCGGCAGAATGCTTTTGGGATACGCTTAAAGAAATGGCTATTCCTTGT ATTACAATCGGGCTTGTTGTTGCCTTTGCTTTTGTGTCAAAAAATAGCGGTATGAGTGCGACTTTGGGGACAGCTTTTGC AAAAACAGGTGATATGTTTGCTTTCTTTAGCCCGGTTATTGGGTGGCTTGGCGTGTTTATTACTGGCAGTGATACAAACT CAAATCTGCTTTTTGGGACATTACAGCAAATCACAGCGCAAGAGCTTGGCGTGAAAGAGGCATTATTCTTGGCGGCAAAC TCTGTGGGTGGCGTTGTTGGCAAGATGATAAGCCCACAAAGTATAGCCATTGCTTGTGTGGCGGTTGGGCTAGTTGGTAG GGAATCTGAGCTATTTAAATTTACACTCAAATATTCCCTTGCTCTCATTATTCTCATTGGGATTTGGACGACAATTATTG CTATGTTTTTGCCGACAATTATCCCAGATGTTGTGCCGCTACATCATTAA Protein sequence : MEVWQQVYDPFNSIWLSAAVAFLPIACFLVCLLVFKLKGYQAGFLTVVLASVLAVVAYDMPFSLVGASFVQGFAQGIWPI AWIIIAAIFLYKLSVKSGAFEVIKSSVITITPDHRIQVILIGFCFGSFLEGAIGFGGPVAITAALLVGLGLRPLYAAGLC LIANTAPVAFGAVGIPIIAMTNLVRIEQYAVAAMVGRMLVPLSLTIPFFIVFLMDGFKGVRETFPAILIAAISFTGTQYF SSNHWGAELPDIVSAIVSLLCTTLFLRIWQPKNIFRLDDEKDFSKKSTLSVGQIFKAWLPFVLLIVCIVIWTQPWFKALF EEGAIFDYTQVTIAFDNIALSIVDPKGAAVSLALPVNFIALQAGTAILVAAFLTILFLRIKSSDAAECFWDTLKEMAIPC ITIGLVVAFAFVSKNSGMSATLGTAFAKTGDMFAFFSPVIGWLGVFITGSDTNSNLLFGTLQQITAQELGVKEALFLAAN SVGGVVGKMISPQSIAIACVAVGLVGRESELFKFTLKYSLALIILIGIWTTIIAMFLPTIIPDVVPLHH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcA | CAE85240.1 | GlcA protein, putative glycolate permease | Not tested | PAI V 536 | Protein | 3e-98 | 52 |
