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Name : katA (HCBAA847_0215) Accession : YP_007600096.1 Strain : Helicobacter cinaedi ATCC BAA-847 Genome accession: NC_020555 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : - COG ID : - EC number : 1.11.1.6 Position : 221467 - 222912 bp Length : 1446 bp Strand : + Note : similiar to HCN_0210 of H. cinaedi PAGU611 DNA sequence : ATGGCAAATTTCAAGTCATTAACCACAACCACAGGACGCCAAGTTGGTGATAACCAAAATGTAATGAGCGTAGGACCACG CGGACCGCTACTTTTGCAAGATACTTGGTATTTAGAGAAACTAGCGGCATTTGATAGAGAGAGAATCCCCGAGCGCGTAG TGCATGCACGCGGAAGTGGCGCACACGGCGTATTTGAAGCTACTGCTGATATTAGCAAATATTCAAAAGCAGCGGTATTT AAAAAAGGCACAAAAACGCCTATGTTTATTCGTTTTTCAACCGTTGCCCCAGAGTTAGGCTCAGCCGATGCGGTGCGCGA CCCTAGAGGCTTTGCGGTGAAATTTTACACTACGGAGGGAAATTGGGATTTAGTTGGCAATAATACGCCTATTTTCTTTA TACGCGACCCCTACAAATTCCCAGATTTTATCCACAGCCAAAAGCGCGACCCAAAAACACATATCCAAAACCCTGAGCGG TGGTGGGATTTTTGGTGTCAAACCCCAGAGGCATTGCACCAAATCACCTATCTTATGGGCGATAGAGGCATACCTGCAAG CTACCGCAATATGAATGGCTACGGAAGCCACACTTTTAGTCTTATCAATGACAAAAATCAGCGATTTTGGGTGAAATTTC ATTTTCACACAATGCAAGGGATAAAAAACCTCACAAATGAAGAGGCGGCAGCGATTCGTGCGGTAGATATGGATTCTCAT CAACGCGATTTGTTTGAGTCAATCGAAAAGGGCGATTATCCCAAATGGAGAGTTTCAATCCAAGTAATGCCCGAATCAGA AGCAAAGACTTATCGATTCCACCCATTTGATGTAACAAAGACTTGGAGTCATAAGGATTATCCGCTTATTGAGATTGGTA TTATGACACTTAATAAAAACCCAGAAAATTACTTTGCCGAAGTTGAACAAGCTGCGTTTAATCCCGCTAGTGTGGTGCCA GGCATTGGGTATAGTCCAGATAGATTGCTTCAAGGCAGACTCTTTGCTTATGGGGATACACAACGCTACCGACTAGGCAT TAACCACCATCAGATTCCGATAAATGCACCAAAATCCGCGCTTAATTCTAGTGTGCGCGATGGCTATATGACAAATGGCG CGTATGGCAGCATTCGCAATTATGAACCTAGTATTTTGGACGGATATAAGGATAATTGGAGTTTAAAAGAGCCGATTTTA GACCCGCTAAACTTTGAGAGTGAAAGCAAACTCGGGCAGTGGGATTATAGAGAAGATGACGATGATTACTACACACAAGC GGGTGATTTGTATCGGCTAATGAGTAGCGATGAGAAAGAGCGGCTTTGTCAAACGATTGCAGGCACGATGAAAGGCATAA ATGAAAAAATCATTAAGTTGCAATTAGAGCATTTTAATAAGGCTGATAGCAACTATGCAGCAAGAATAGCCCAGCTTCTA AAATAA Protein sequence : MANFKSLTTTTGRQVGDNQNVMSVGPRGPLLLQDTWYLEKLAAFDRERIPERVVHARGSGAHGVFEATADISKYSKAAVF KKGTKTPMFIRFSTVAPELGSADAVRDPRGFAVKFYTTEGNWDLVGNNTPIFFIRDPYKFPDFIHSQKRDPKTHIQNPER WWDFWCQTPEALHQITYLMGDRGIPASYRNMNGYGSHTFSLINDKNQRFWVKFHFHTMQGIKNLTNEEAAAIRAVDMDSH QRDLFESIEKGDYPKWRVSIQVMPESEAKTYRFHPFDVTKTWSHKDYPLIEIGIMTLNKNPENYFAEVEQAAFNPASVVP GIGYSPDRLLQGRLFAYGDTQRYRLGINHHQIPINAPKSALNSSVRDGYMTNGAYGSIRNYEPSILDGYKDNWSLKEPIL DPLNFESESKLGQWDYREDDDDYYTQAGDLYRLMSSDEKERLCQTIAGTMKGINEKIIKLQLEHFNKADSNYAARIAQLL K |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 5e-130 | 56 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 7e-94 | 46 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 1e-91 | 45 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 1e-91 | 45 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 1e-91 | 45 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 1e-91 | 45 |
