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Name : thiC (HCBAA847_1801) Accession : YP_007601652.1 Strain : Helicobacter cinaedi ATCC BAA-847 Genome accession: NC_020555 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein Function : - COG functional category : - COG ID : - EC number : - Position : 1699864 - 1701243 bp Length : 1380 bp Strand : + Note : similiar to HCN_1574 of H. cinaedi PAGU611 DNA sequence : ATGAGAACACAATGGGTGCAAGAGAGATTGATGCAAGAACGCACCAAGGATTCAATCCGCACACAGCTACACTACGCCAA AAAGGGCATTATCACTAAAGAAATGGAATATGTCGCTAATGTCGAGAATCTAAGCCCAGAGCTTATCCGCCAAGAGATTG AGCGGGGGCGGCTCATAATCCCAGCAAACATTAATCACACCAACCTTGAGCCTATGGGGATTGGCATAGCCACACGCACG AAAATTAACTCAAATATCGGTAGCTCCTCTCTTGCAAGCTCCATTGAAGAAGAAGTTGAAAAGGTTAAAGTTTCTATAAA ATATGGTGCGGATACGATTATGGATCTAAGCACGGGCGGGGATTTAGATGAGATAAGAAAAGCAGTTATCAATGCTTCAA GTGTGCCTATTGGCACGGTGCCTATGTATCAGATTCTCTATGATGTGAAAAATGATGTCTTAAAGCTAGATATACAAACT ATGCTTGATGTGCTAAGAAAACAAGCCAAACAAGGGGTAAGCTACTTTACTATCCATTGTGGATTCTTACTTTCACATAT GCCTTTTGTGGCGAAGCGAAAAATGGGGATTGTCTCACGCGGTGGAAGCCTTATGGCAAGCTGGATGATGCACTATCACA AAGAGAATCCATTCTATGAATATTTTGATGAGATTCTAAAAATCTGCCAAGAGTATGATGTGAGTTTGTCTTTAGGGGAT TCTTTGCGTCCGGGCTGCTTGTATGATGCAAGTGATGAAGCACAATTTGCTGAACTCAAAGTGCTAGGGGAGTTAGCAAA AAGGGCGTGGGAAGCTGATGTGCAAGTAATGATAGAAGGTCCCGGACATGTGCCGCTTAATCAAATTGAACGCAATGTAG AGTTACAAAAGCAATACTGCAATCAAGCACCCTTTTATGTGCTAGGACCGCTTGTTACAGATATTGCTGCTGGGTATGAT CACATCGCAAGTGCCATTGGTGCGTGTGTGGCGGCGTGGAAAGGTGTAGCAATGCTCTGCTATGTAACGCCAAAGGAGCA TTTGGGACTGCCTAATGCTAAAGATGTAAGGGAAGGAATCTTAGCTTATAAAATTGCTGCTCACGCCGCAGACATTGCTA GAGGACGAATTGGCGCAAGAGATAGAGATGATGCGATGAGTGATGCGAGATATAGCTTTGATTGGAATAAACAATTTGAG CTCGCCCTTGATCCTGATAGGGCAAGGGAATATCACGATGAAGCCTTGCCACAAGAAGTCTTTAAAGACGCGGAGTTTTG CTCAATGTGTGGTCCAAAATTTTGTAGCTATAAAATCTCACAAGACATTTTTAAAGCCCACAAGCAAGATGAAAAAGAGC CTATGGCAGTAAATGAATGA Protein sequence : MRTQWVQERLMQERTKDSIRTQLHYAKKGIITKEMEYVANVENLSPELIRQEIERGRLIIPANINHTNLEPMGIGIATRT KINSNIGSSSLASSIEEEVEKVKVSIKYGADTIMDLSTGGDLDEIRKAVINASSVPIGTVPMYQILYDVKNDVLKLDIQT MLDVLRKQAKQGVSYFTIHCGFLLSHMPFVAKRKMGIVSRGGSLMASWMMHYHKENPFYEYFDEILKICQEYDVSLSLGD SLRPGCLYDASDEAQFAELKVLGELAKRAWEADVQVMIEGPGHVPLNQIERNVELQKQYCNQAPFYVLGPLVTDIAAGYD HIASAIGACVAAWKGVAMLCYVTPKEHLGLPNAKDVREGILAYKIAAHAADIARGRIGARDRDDAMSDARYSFDWNKQFE LALDPDRAREYHDEALPQEVFKDAEFCSMCGPKFCSYKISQDIFKAHKQDEKEPMAVNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 2e-102 | 59 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 2e-102 | 59 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 2e-96 | 54 |
