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Name : rplS (HCBAA847_0176) Accession : YP_007600062.1 Strain : Helicobacter cinaedi ATCC BAA-847 Genome accession: NC_020555 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : - COG ID : - EC number : - Position : 189093 - 189449 bp Length : 357 bp Strand : - Note : similiar to HCN_0175 of H. cinaedi PAGU611 DNA sequence : ATGAGAAATAGATATATTGAGAGCTTCAATAAAGCACAGATCGGCGAGAGAAAAGTGCCACAATTTAAAGCTGGAGACAC ACTCCGCCTAGGCATAAAGATTCAAGAAGGCGATAAGAGCAGAATCCAGCACTTTGAAGGTGTGTGCATTGCCATACGCG GAAATGGTGTAGATAGGACATTTACAACAAGAAAAATGGGTGCAAACAACATCGGTGTGGAAAAAACTTTCCCACTTTAT AGCGAGAGTTTGGATAGCATAGAAGTATTGCGTATTGGTCGTGTCCGCCGTGCTAAACTCTACTACCTACGCACAAGACG CGGTAAAGCTGCGAGAATCAAAGAGCTTCGCAAATAA Protein sequence : MRNRYIESFNKAQIGERKVPQFKAGDTLRLGIKIQEGDKSRIQHFEGVCIAIRGNGVDRTFTTRKMGANNIGVEKTFPLY SESLDSIEVLRIGRVRRAKLYYLRTRRGKAARIKELRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 8e-25 | 54 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 1e-19 | 53 |
