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Name : HCBAA847_1404 (HCBAA847_1404) Accession : YP_007601265.1 Strain : Helicobacter cinaedi ATCC BAA-847 Genome accession: NC_020555 Putative virulence/resistance : Unknown Product : putative phage integrase Function : - COG functional category : - COG ID : - EC number : - Position : 1352923 - 1354062 bp Length : 1140 bp Strand : + Note : similiar to HCN_1328 of H. cinaedi PAGU611 DNA sequence : ATGCGATACTCTTTTGGGGATAAAAGAAAGCTTATTACTATTGGGCAATATCCATCTGTTTCCTTGGAGCAGACAAGAGA GAATGCTATTGGATACAAAAAACTTATTCTGGCAGAAGCTGATCCACAAGAAAATAAAAAGCTAGACAAAGCAGCCAAAA TAAAAATGAAAGAGGGACAACTGCACCTAGTGGTAGAAGCATGGCTCAAATTCAAAGAAAAGCAAGTTACCTATTCCACA CTCAAAAGAGATAGACGAATGATGGAGCAACACCTTTTGCCGAATTTTTCAAAATATGAATCTGATAGAAAAATTGTAAG CTCCACACACATTGAGGATATTGCACATTCAGACATTACGCATATTATCGCAAAGATTCAAGACTATAGGGTAGAGCTTG CTAGAAGACTTTTTGCCCATTGTCTTAGTATATGGCAATTTGCCCTTGGTCGCGGATACACAGAAACAAATTACCTATTC AAAATTGACACAAAACAACTTCTTTTGCCTAAAGTAACAAATCACTATGAAAAGATTACAGATGAAGCAACGCTAGGAGA ACTTTTGAGGGCTATTGATGGGTATATTCATTCTTCTATTATACGATCGGCATTAAAGTTTGTAAGCATTATTCCTTTAA GGGCTGAAAACCTTGCTACATTGAAGTGGAGTTATATTGATTTTGAGAAAAAGATACTCACCATTCCAAGAAGCGAGATG AAAGTCAAAAAGAAATCATTCCCGGATTTTTCCCTTCCTTTGCCTACACAAGCTATTGAGATTCTAAAGGAAATTAAAAA AAATACAGGTTGGGGTGTTTGGATATTCCACGGACACAATAAAATACATAAACCGATGGTGTCAGAGAGTGCTAATAAAG CTTTGCGTTCTATGGGTTTTGCAGATGCCAAAAGAGGCAGGAAGCAAACACTTCACTCTTTTAGGGGAACTTTTAGAAGC CTTTGTGATACACACCAAGACAAACATAACGCATCATTTGAGATTAAAGAGGCTGTGCTAGATCATAGAATAGGTAATAA TGTTACACAAGCCTATCTACATAAAGCTTATTATGTTGAGCAGATGAGACCACTTTTGCAATGGTGGGCTGATTACTTAG ATGAGCTTAAAGAGTGCTAG Protein sequence : MRYSFGDKRKLITIGQYPSVSLEQTRENAIGYKKLILAEADPQENKKLDKAAKIKMKEGQLHLVVEAWLKFKEKQVTYST LKRDRRMMEQHLLPNFSKYESDRKIVSSTHIEDIAHSDITHIIAKIQDYRVELARRLFAHCLSIWQFALGRGYTETNYLF KIDTKQLLLPKVTNHYEKITDEATLGELLRAIDGYIHSSIIRSALKFVSIIPLRAENLATLKWSYIDFEKKILTIPRSEM KVKKKSFPDFSLPLPTQAIEILKEIKKNTGWGVWIFHGHNKIHKPMVSESANKALRSMGFADAKRGRKQTLHSFRGTFRS LCDTHQDKHNASFEIKEAVLDHRIGNNVTQAYLHKAYYVEQMRPLLQWWADYLDELKEC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HH0269 | NP_859800.1 | integrase | Not tested | HHGI1 | Protein | 4e-86 | 67 |
